Curated BLAST
Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 35 curated entries in PaperBLAST's database that match '1.1.1.3' as complete word(s).
These curated entries have 29 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_2273: Homoserine dehydrogenase (RefSeq)
is similar to: | PaperBLAST |
Ga0059261_2711: homoserine dehydrogenase (EC 1.1.1.3) from Sphingomonas koreensis | 51% id,
99% cov |
Q56R01: homoserine dehydrogenase (EC 1.1.1.3) from Streptomyces clavuligerus | 42% id,
99% cov |
P46806: homoserine dehydrogenase (EC 1.1.1.3) from Mycobacterium leprae | 42% id,
99% cov |
DHOM_NEIG1 / Q5F8J4: NAD(+)-dependent homoserine dehydrogenase; NAD(+)-dependent HSD; NgHSD; EC 1.1.1.3 from Neisseria gonorrhoeae | 40% id,
99% cov |
DHOM_CORGL / P08499: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Corynebacterium glutamicum
P08499: homoserine dehydrogenase (EC 1.1.1.3) from Corynebacterium glutamicum | 40% id,
96% cov |
DHOM_BACSU / P19582: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Bacillus subtilis
P19582: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus subtilis | 37% id,
98% cov |
DvMF_1412: homoserine dehydrogenase (EC 1.1.1.3) from Desulfovibrio vulgaris | 38% id,
97% cov |
D8WXQ1: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus | 37% id,
98% cov |
Q5SL04: homoserine dehydrogenase (EC 1.1.1.3) from Thermus thermophilus | 37% id,
92% cov |
DHOM_LACLC / P52985: Homoserine dehydrogenase; HDH; EC 1.1.1.3 from Lactococcus lactis | 33% id,
96% cov |
D8WXQ2: homoserine dehydrogenase (EC 1.1.1.3) from Bacillus methanolicus | 37% id,
78% cov |
F9VNG5: homoserine dehydrogenase (EC 1.1.1.3) from Sulfurisphaera tokodaii | 29% id,
99% cov |
O58802: homoserine dehydrogenase (EC 1.1.1.3) from Pyrococcus horikoshii | 30% id,
96% cov |
A0A0H2WVX4: homoserine dehydrogenase (EC 1.1.1.3) from Staphylococcus aureus | 37% id,
74% cov |
Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima | 33% id,
49% cov |
More... |
Dshi_2061: aspartate kinase (RefSeq)
is similar to: | PaperBLAST |
Q9WZ17: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Thermotoga maritima | 38% id,
54% cov |
CA265_RS23475: aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Pedobacter sp. | 32% id,
42% cov |
Echvi_2000: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Echinicola vietnamensis | 31% id,
42% cov |
BT2403: aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) from Bacteroides thetaiotaomicron | 29% id,
42% cov |
AKH1_ARATH / Q9SA18: Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic; AK-HD 1; AK-HSDH 1; Beta-aspartyl phosphate homoserine 1; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana | 32% id,
39% cov |
ThrD / b0002: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
thrA / P00561: fused aspartate kinase/homoserine dehydrogenase 1 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
P00561: homoserine dehydrogenase (EC 1.1.1.3); aspartate kinase (EC 2.7.2.4) from Escherichia coli | 35% id,
35% cov |
O63067: homoserine dehydrogenase (EC 1.1.1.3) from Glycine max | 30% id,
39% cov |
AKH2_ARATH / O81852: Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic; AK-HD 2; AK-HSDH 2; Beta-aspartyl phosphate homoserine 2; EC 2.7.2.4; EC 1.1.1.3 from Arabidopsis thaliana | 30% id,
39% cov |
MetM / b3940: fused aspartate kinase/homoserine dehydrogenase 2 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli
metL / P00562: fused aspartate kinase/homoserine dehydrogenase 2 (EC 2.7.2.4; EC 1.1.1.3) from Escherichia coli | 24% id,
48% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory