Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 9 curated entries in PaperBLAST's database that match '1.1.1.31' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1752: 3-hydroxyisobutyrate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 50% id, 99% cov |
PfGW456L13_5145: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 50% id, 98% cov |
Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri | 49% id, 99% cov |
| Dshi_3047: 6-phosphogluconate dehydrogenase NAD-binding (RefSeq) is similar to: | PaperBLAST |
AO353_05985: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 35% id, 99% cov |
PfGW456L13_5145: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas fluorescens | 35% id, 99% cov |
Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri | 34% id, 99% cov |
| Dshi_4221: 2-hydroxy-3-oxopropionate reductase (RefSeq) is similar to: | PaperBLAST |
MMSB_PSEAE / P28811: 3-hydroxyisobutyrate dehydrogenase; HIBADH; EC 1.1.1.31 from Pseudomonas aeruginosa | 35% id, 99% cov |
Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri | 31% id, 99% cov |
P9WNY5: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Mycobacterium tuberculosis | 29% id, 99% cov |
| Dshi_2443: 6-phosphogluconate dehydrogenase NAD-binding (RefSeq) is similar to: | PaperBLAST |
Psest_2438: 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) from Pseudomonas stutzeri | 33% id, 95% cov |
3HIDH_HUMAN / P31937: 3-hydroxyisobutyrate dehydrogenase, mitochondrial; HIBADH; EC 1.1.1.31 from Homo sapiens | 34% id, 75% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2586436-2588184 (frame -3) on 57145 is similar to: | PaperBLAST |
3HIDH_HUMAN / P31937: 3-hydroxyisobutyrate dehydrogenase, mitochondrial; HIBADH; EC 1.1.1.31 from Homo sapiens | 33% id, 85% cov |
Lawrence Berkeley National Laboratory