Curated BLAST
Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 17 curated entries in PaperBLAST's database that match '1.1.2.3' as complete word(s).
These curated entries have 15 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_0948: L-lactate dehydrogenase (cytochrome) (RefSeq)
is similar to: | PaperBLAST |
Ac3H11_1623: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Acidovorax sp. | 66% id,
98% cov |
SM_b20850: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Sinorhizobium meliloti | 66% id,
98% cov |
Q9I197: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas aeruginosa | 63% id,
99% cov |
PS417_19130: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas simiae | 45% id,
100% cov |
Q9HV37: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas aeruginosa | 45% id,
98% cov |
lldD: L-lactate dehydrogenase [cytochrome]; EC 1.1.2.3 from Escherichia coli | 42% id,
99% cov |
W1QKE8: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Ogataea angusta | 34% id,
31% cov |
CYB2_YEAST / P00175: L-lactate dehydrogenase (cytochrome); Cytochrome b2; Flavocytochrome b2; FCB2; L-lactate ferricytochrome c oxidoreductase; L-LCR; EC 1.1.2.3 from Saccharomyces cerevisiae
CYB2 / P00175: L-lactate dehydrogenase subunit (EC 1.1.2.3) from Saccharomyces cerevisiae
P00175: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Saccharomyces cerevisiae | 36% id,
28% cov |
A0A099P7X2: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pichia kudriavzevii | 33% id,
30% cov |
More... |
Dshi_2484: FMN-dependent alpha-hydroxy acid dehydrogenase (RefSeq)
is similar to: | PaperBLAST |
Q9HV37: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas aeruginosa | 37% id,
96% cov |
Q9I197: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas aeruginosa | 36% id,
98% cov |
lldD: L-lactate dehydrogenase [cytochrome]; EC 1.1.2.3 from Escherichia coli | 36% id,
95% cov |
PS417_19130: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas simiae | 35% id,
97% cov |
SM_b20850: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Sinorhizobium meliloti | 33% id,
98% cov |
Ac3H11_1623: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Acidovorax sp. | 31% id,
93% cov |
CYB2_YEAST / P00175: L-lactate dehydrogenase (cytochrome); Cytochrome b2; Flavocytochrome b2; FCB2; L-lactate ferricytochrome c oxidoreductase; L-LCR; EC 1.1.2.3 from Saccharomyces cerevisiae
CYB2 / P00175: L-lactate dehydrogenase subunit (EC 1.1.2.3) from Saccharomyces cerevisiae
P00175: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Saccharomyces cerevisiae | 25% id,
60% cov |
W1QKE8: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Ogataea angusta | 26% id,
30% cov |
More... |
Dshi_1868: ferredoxin-dependent glutamate synthase (RefSeq)
is similar to: | PaperBLAST |
Q9HV37: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas aeruginosa | 31% id,
36% cov |
CYB2_YEAST / P00175: L-lactate dehydrogenase (cytochrome); Cytochrome b2; Flavocytochrome b2; FCB2; L-lactate ferricytochrome c oxidoreductase; L-LCR; EC 1.1.2.3 from Saccharomyces cerevisiae
CYB2 / P00175: L-lactate dehydrogenase subunit (EC 1.1.2.3) from Saccharomyces cerevisiae
P00175: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Saccharomyces cerevisiae | 23% id,
43% cov |
lldD: L-lactate dehydrogenase [cytochrome]; EC 1.1.2.3 from Escherichia coli | 30% id,
31% cov |
PS417_19130: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas simiae | 34% id,
27% cov |
Ac3H11_1623: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Acidovorax sp. | 38% id,
21% cov |
SM_b20850: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Sinorhizobium meliloti | 32% id,
25% cov |
Q9I197: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Pseudomonas aeruginosa | 35% id,
21% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory