Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 1 curated entries in PaperBLAST's database that match '1.13.12.4' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_0948: L-lactate dehydrogenase (cytochrome) (RefSeq) is similar to: | PaperBLAST |
LMO_MYCSM / P21795: L-lactate 2-monooxygenase; LMO; Lactate monooxygenase; EC 1.13.12.4 from Mycolicibacterium smegmatis | 35% id, 90% cov |
| Dshi_2484: FMN-dependent alpha-hydroxy acid dehydrogenase (RefSeq) is similar to: | PaperBLAST |
LMO_MYCSM / P21795: L-lactate 2-monooxygenase; LMO; Lactate monooxygenase; EC 1.13.12.4 from Mycolicibacterium smegmatis | 30% id, 92% cov |
| Dshi_1868: ferredoxin-dependent glutamate synthase (RefSeq) is similar to: | PaperBLAST |
LMO_MYCSM / P21795: L-lactate 2-monooxygenase; LMO; Lactate monooxygenase; EC 1.13.12.4 from Mycolicibacterium smegmatis | 34% id, 34% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2636554-2637729 (frame +1) on 57145 is similar to: | PaperBLAST |
LMO_MYCSM / P21795: L-lactate 2-monooxygenase; LMO; Lactate monooxygenase; EC 1.13.12.4 from Mycolicibacterium smegmatis | 31% id, 94% cov |
Lawrence Berkeley National Laboratory