Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 22 curated entries in PaperBLAST's database that match '1.14.13.9' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_0062: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family (RefSeq)
is similar to:		 PaperBLAST

Q95NP6: kynurenine 3-monooxygenase (EC 1.14.13.9) from Tribolium castaneum

 26% id,
79% cov

KMO_AEDAE / Q86PM2: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Aedes aegypti
Q86PM2: kynurenine 3-monooxygenase (EC 1.14.13.9) from Aedes aegypti

 27% id,
72% cov

KMO_YEAST / P38169: Kynurenine 3-monooxygenase; Biosynthesis of nicotinic acid protein 4; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Saccharomyces cerevisiae
P38169: kynurenine 3-monooxygenase (EC 1.14.13.9) from Saccharomyces cerevisiae

 25% id,
74% cov

More...

Dshi_1885: monooxygenase FAD-binding (RefSeq)
is similar to:		 PaperBLAST

Q8ISJ5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Anopheles stephensi

 27% id,
67% cov

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

 31% id,
38% cov

KMO_PSEFL / Q84HF5: Kynurenine 3-monooxygenase; PfKMO; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Pseudomonas fluorescens
Q84HF5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Pseudomonas fluorescens

 32% id,
26% cov

More...

Dshi_3058: hypothetical protein (RefSeq)
is similar to:		 PaperBLAST

A1Z745: kynurenine 3-monooxygenase (EC 1.14.13.9) from Drosophila melanogaster

 34% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1962188-1963384 (frame +2) on 57145
is similar to:		 PaperBLAST

Q8ISJ5: kynurenine 3-monooxygenase (EC 1.14.13.9) from Anopheles stephensi
Also see hits to annotated proteins above

 27% id,
68% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory