Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 27 curated entries in PaperBLAST's database that match '1.2.1.26' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 12 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_0577: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

57% id,
99% cov

PS417_04200: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae

57% id,
100% cov

Ac3H11_612: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Acidovorax sp.

58% id,
97% cov

More...

Dshi_2442: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

KGSD2_AZOBR / Q08IC0: Alpha-ketoglutaric semialdehyde dehydrogenase 2; alphaKGSA dehydrogenase 2; 2,5-dioxovalerate dehydrogenase 2; KGSADH-II; EC 1.2.1.26 from Azospirillum brasilense
Q08IC0: 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

55% id,
95% cov

kgsD / Q9I1Q0: 2-ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas aeruginosa

54% id,
94% cov

lhpG / Q88NF5: α-ketoglutaric semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Pseudomonas putida

53% id,
94% cov

More...

Dshi_2887: succinic semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

41% id,
96% cov

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

36% id,
97% cov

xylA / A0A0H3C801: 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Caulobacter vibrioides

35% id,
98% cov

More...

Dshi_1095: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

38% id,
98% cov

PS417_04200: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae

37% id,
99% cov

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

37% id,
99% cov

More...

Dshi_1747: methylmalonate-semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

37% id,
98% cov

Ac3H11_612: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Acidovorax sp.

37% id,
97% cov

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

36% id,
98% cov

More...

Dshi_3017: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

xylA / A0A0H3C801: 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Caulobacter vibrioides

36% id,
97% cov

Ac3H11_612: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Acidovorax sp.

36% id,
96% cov

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

35% id,
98% cov

More...

Dshi_3021: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Ac3H11_612: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Acidovorax sp.

36% id,
96% cov

xylA / A0A0H3C801: 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Caulobacter vibrioides

35% id,
97% cov

KGSDH_HALVD / D4GP41: Alpha-ketoglutarate semialdehyde dehydrogenase; KGSADH; EC 1.2.1.26 from Haloferax volcanii
xacF / D4GP41: α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Haloferax volcanii

34% id,
98% cov

More...

Dshi_1425: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

35% id,
98% cov

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

35% id,
98% cov

PS417_04200: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae

34% id,
98% cov

More...

Dshi_1430: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

xylA / A0A0H3C801: 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Caulobacter vibrioides

36% id,
94% cov

KGSDH_HALVD / D4GP41: Alpha-ketoglutarate semialdehyde dehydrogenase; KGSADH; EC 1.2.1.26 from Haloferax volcanii
xacF / D4GP41: α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Haloferax volcanii

35% id,
95% cov

Ac3H11_612: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Acidovorax sp.

36% id,
93% cov

More...

Dshi_3717: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

xylA / A0A0H3C801: 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Caulobacter vibrioides

32% id,
99% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

31% id,
98% cov

KGSDH_HALVD / D4GP41: Alpha-ketoglutarate semialdehyde dehydrogenase; KGSADH; EC 1.2.1.26 from Haloferax volcanii
xacF / D4GP41: α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Haloferax volcanii

31% id,
99% cov

More...

Dshi_2311: delta-1-pyrroline-5-carboxylate dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Ac3H11_612: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Acidovorax sp.

32% id,
96% cov

KGSDH_BACSU / P42236: Alpha-ketoglutaric semialdehyde dehydrogenase; alphaKGSA dehydrogenase; 2,5-dioxovalerate dehydrogenase; EC 1.2.1.26 from Bacillus subtilis

32% id,
93% cov

KGSDH_SACS2 / Q97UA1: 2,5-dioxopentanoate dehydrogenase; Aldehyde dehydrogenase T; Alpha-ketoglutaric semialdehyde dehydrogenase AldhT; EC 1.2.1.26 from Saccharolobus solfataricus
dopDH / Q97UA1: 2,5-dioxopentanoate dehydrogenase subunit (EC 1.2.1.26) from Saccharolobus solfataricus
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

32% id,
90% cov

More...

Dshi_3827: phenylacetic acid degradation protein paaN (RefSeq)
is similar to:
PaperBLAST

PS417_04200: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae

25% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory