Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 105 curated entries in PaperBLAST's database that match '1.2.1.3' as complete word(s).

These curated entries have 88 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1095: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ALDH_PARDP / A1B4L2: Aldehyde dehydrogenase; Acetaldehyde dehydrogenase; EC 1.2.1.3 from Paracoccus denitrificans
adh / A1B4L2: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Paracoccus denitrificans

77% id,
97% cov

Q4F895: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rhodococcus erythropolis

70% id,
98% cov

ald / Q8NLZ0: acetaldehyde dehydrogenase (EC 1.2.1.3; EC 1.2.1.46) from Corynebacterium glutamicum

69% id,
97% cov

More...

Dshi_3017: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS25810: acetaldehyde dehydrogenase (EC 1.2.1.3) from Burkholderia phytofirmans

62% id,
100% cov

H281DRAFT_01117: acetaldehyde dehydrogenase (EC 1.2.1.3) from Paraburkholderia bryophila

62% id,
100% cov

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

44% id,
94% cov

More...

Dshi_2887: succinic semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

55% id,
94% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

38% id,
97% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

37% id,
97% cov

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Dshi_1425: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

LUC3_FUSSX / A0A6J4B898: Aldehyde dehydrogenase LUC3; Lucilactaene biosynthesis cluster protein 3; EC 1.2.1.3 from Fusarium sp.

40% id,
100% cov

FUS7_GIBM7 / W7MWX4: Putative aldehyde dehydrogenase FUS7; Fusarin biosynthesis protein 7; EC 1.2.1.3 from Gibberella moniliformis

42% id,
95% cov

FUS7_GIBF5 / S0ENH1: Putative aldehyde dehydrogenase FUS7; Fusarin biosynthesis protein 7; EC 1.2.1.3 from Gibberella fujikuroi

41% id,
95% cov

More...

Dshi_1430: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

42% id,
92% cov

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

42% id,
91% cov

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

40% id,
92% cov

More...

Dshi_3021: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus

39% id,
96% cov

AL9A1_HUMAN / P49189: 4-trimethylaminobutyraldehyde dehydrogenase; TMABA-DH; TMABALDH; Aldehyde dehydrogenase E3 isozyme; Aldehyde dehydrogenase family 9 member A1; Formaldehyde dehydrogenase; Gamma-aminobutyraldehyde dehydrogenase; R-aminobutyraldehyde dehydrogenase; EC 1.2.1.47; EC 1.2.1.3; EC 1.2.1.46; EC 1.2.1.19 from Homo sapiens
ALDH9A1 / P49189: aldehyde dehydrogenase, E3 isozyme (EC 1.2.1.19; EC 1.2.1.3; EC 1.2.1.47) from Homo sapiens

39% id,
96% cov

AL1A1_MACFA / Q8HYE4: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Macaca fascicularis

38% id,
97% cov

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Dshi_0577: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

36% id,
95% cov

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

34% id,
100% cov

ALDH1_ELEED / Q28399: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ETA-crystallin; EC 1.2.1.3 from Elephantulus edwardii

36% id,
95% cov

More...

Dshi_3717: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

AL2B4_ARATH / Q9SU63: Aldehyde dehydrogenase family 2 member B4, mitochondrial; ALDH2a; EC 1.2.1.3 from Arabidopsis thaliana

38% id,
87% cov

aldA / RF|XP_658158.1: aldehyde dehydrogenase ALDH; EC 1.2.1.3 from Emericella nidulans

36% id,
93% cov

Q402C7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Sphingomonas sp.

35% id,
95% cov

More...

Dshi_1747: methylmalonate-semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

33% id,
97% cov

AL1A1_HORSE / P15437: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Equus caballus

34% id,
94% cov

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

34% id,
94% cov

More...

Dshi_2311: delta-1-pyrroline-5-carboxylate dehydrogenase (RefSeq)
is similar to:
PaperBLAST

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

30% id,
98% cov

AL1A7_RAT / P13601: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Rattus norvegicus

30% id,
98% cov

AL1A1_RAT / P51647: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Rattus norvegicus

30% id,
98% cov

More...

Dshi_2442: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

27% id,
91% cov

Q402C7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Sphingomonas sp.

26% id,
91% cov

CITD_MONPU / Q1ERI2: Aldehyde dehydrogenase mpl4; Citrinin synthesis protein mpl4; EC 1.2.1.3 from Monascus purpureus
CITD_MONRU / A0A162J448: Aldehyde dehydrogenase citD; Citrinin synthesis protein D; EC 1.2.1.3 from Monascus ruber

25% id,
82% cov

More...

Dshi_3827: phenylacetic acid degradation protein paaN (RefSeq)
is similar to:
PaperBLAST

Q92UV7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Sinorhizobium meliloti

27% id,
74% cov

A6T8Z5: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Klebsiella pneumoniae

26% id,
69% cov

AL9A1_ORYLA / Q19A30: 4-trimethylaminobutyraldehyde dehydrogenase; TMABA-DH; TMABADH; Aldehyde dehydrogenase family 9 member A1; EC 1.2.1.47; EC 1.2.1.3 from Oryzias latipes

24% id,
73% cov

More...

Dshi_0551: Alcohol dehydrogenase GroES domain protein (RefSeq)
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

24% id,
62% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

6438-7652 (frame +3) on 57150
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator
Also see hits to annotated proteins above

27% id,
93% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory