Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 13 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_2945: Prephenate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium | 59% id, 85% cov |
TYRC_ZYMMO / Q04983: Cyclohexadienyl dehydrogenase; Arogenate dehydrogenase; ADH; Prephenate dehydrogenase; PDH; EC 1.3.1.43; EC 1.3.1.12 from Zymomonas mobilis | 42% id, 97% cov |
O67636: prephenate dehydrogenase (EC 1.3.1.12) from Aquifex aeolicus | 34% id, 92% cov |
Dshi_1967: catalytic domain of components of various dehydrogenase complexes (RefSeq) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 53% id, 67% cov |
Dshi_2884: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase (RefSeq) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 34% id, 83% cov |
Dshi_2160: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (RefSeq) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 32% id, 66% cov |
Dshi_0653: Prephenate dehydratase (RefSeq) is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 30% id, 42% cov |
Dshi_0536: biotin/lipoyl attachment domain-containing protein (RefSeq) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 34% id, 27% cov |
Dshi_1966: dihydrolipoamide dehydrogenase (RefSeq) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 51% id, 17% cov |
Dshi_0349: chorismate mutase (RefSeq) is similar to: | PaperBLAST |
P43902: prephenate dehydrogenase (EC 1.3.1.12) from Haemophilus influenzae | 29% id, 23% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
2074137-2075888 (frame -1) on 57145 is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 54% id, 16% cov |
Lawrence Berkeley National Laboratory