Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 1 curated entries in PaperBLAST's database that match '1.3.99.10'.

These curated entries have 1 distinct sequences.

Running ublast with E ≤ 0.01

Found 9 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1297: acyl-CoA dehydrogenase domain protein (RefSeq)
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

57% id,
87% cov

Dshi_0838: acyl-CoA dehydrogenase domain protein (RefSeq)
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

38% id,
81% cov

Dshi_2357: acyl-CoA dehydrogenase domain protein (RefSeq)
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

34% id,
88% cov

Dshi_1750: acyl-CoA dehydrogenase domain protein (RefSeq)
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

35% id,
83% cov

Dshi_0204: acyl-CoA dehydrogenase domain protein (RefSeq)
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

32% id,
87% cov

Dshi_2602: acyl-CoA dehydrogenase domain protein (RefSeq)
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

29% id,
86% cov

Dshi_1058: acyl-CoA dehydrogenase domain protein (RefSeq)
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

28% id,
86% cov

Dshi_3085: acyl-CoA dehydrogenase domain protein (RefSeq)
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

28% id,
80% cov

Dshi_0839: acyl-CoA dehydrogenase domain protein (RefSeq)
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans

25% id,
80% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

848415-849704 (frame -1) on 57145
is similar to:
PaperBLAST

ivdA: isovaleryl-coenzyme A dehydrogenase; EC 1.3.99.10 from Emericella nidulans
Also see hits to annotated proteins above

36% id,
95% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory