Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 2 curated entries in PaperBLAST's database that match '1.5.1.12'.
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 11 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_2311: delta-1-pyrroline-5-carboxylate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 45% id, 94% cov |
prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans | 29% id, 90% cov |
| Dshi_1430: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans | 27% id, 87% cov |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 29% id, 33% cov |
| Dshi_0577: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
prnC: delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; EC 1.5.1.12 from Emericella nidulans | 27% id, 87% cov |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 29% id, 33% cov |
| Dshi_3017: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 30% id, 35% cov |
| Dshi_2887: succinic semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 30% id, 34% cov |
| Dshi_1747: methylmalonate-semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 30% id, 33% cov |
| Dshi_3021: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 28% id, 33% cov |
| Dshi_1425: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 28% id, 34% cov |
| Dshi_3717: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 27% id, 34% cov |
| Dshi_1095: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 28% id, 32% cov |
| Dshi_3827: phenylacetic acid degradation protein paaN (RefSeq) is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 27% id, 28% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 11 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2439534-2443406 (frame +3) on 57145 is similar to: | PaperBLAST |
putA / GB|BAA35791.1: proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; EC 1.5.1.12; EC 1.5.99.8 from Escherichia coli | 44% id, 95% cov |
Lawrence Berkeley National Laboratory