Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 62 curated entries in PaperBLAST's database that match '1.8.1.4'.

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 24 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1966: dihydrolipoamide dehydrogenase (RefSeq)
is similar to:
PaperBLAST

DLDH_ECOLI / P0A9P0: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; Glycine cleavage system L protein; EC 1.8.1.4 from Escherichia coli
Lpd / b0116: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
lpd / SP|P0A9P1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Escherichia coli
lpd / P0A9P0: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
P0A9P0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

63% id,
99% cov

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

68% id,
89% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

60% id,
99% cov

More...

Dshi_2886: dihydrolipoamide dehydrogenase (RefSeq)
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

70% id,
89% cov

Q8MUB0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Bombyx mori

56% id,
93% cov

A0A0H2ZHZ0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

53% id,
98% cov

More...

Dshi_1811: dihydrolipoamide dehydrogenase (RefSeq)
is similar to:
PaperBLAST

P50970: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Zymomonas mobilis

57% id,
100% cov

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta

62% id,
89% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

43% id,
98% cov

More...

Dshi_0335: pyridine nucleotide-disulphide oxidoreductase dimerisation region (RefSeq)
is similar to:
PaperBLAST

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

35% id,
97% cov

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

35% id,
95% cov

DLDH1_GEOSE / P11959: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Geobacillus stearothermophilus
pdhD / GB|CAA37631.1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Geobacillus stearothermophilus
P11959: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Geobacillus stearothermophilus

34% id,
96% cov

More...

Dshi_2737: pyridine nucleotide-disulphide oxidoreductase dimerisation region (RefSeq)
is similar to:
PaperBLAST

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

33% id,
96% cov

A0A0H2ZHZ0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

31% id,
97% cov

DLDH_MYCTU / P9WHH9: Dihydrolipoyl dehydrogenase; LPD; Component of peroxynitrite reductase/peroxidase complex; Component of PNR/P; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Mycobacterium tuberculosis
P9WHH8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis
P9WHH9: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis

31% id,
96% cov

More...

Dshi_1667: nitrite reductase (NAD(P)H), large subunit (RefSeq)
is similar to:
PaperBLAST

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

27% id,
92% cov

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

26% id,
49% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

28% id,
42% cov

Dshi_0114: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq)
is similar to:
PaperBLAST

pdhD / P75393: pyruvate dehydrogenase complex E3 component (EC 1.8.1.4) from Mycoplasma pneumoniae

25% id,
79% cov

DLDH1_PSEPU / P09063: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of branched-chain alpha-keto acid dehydrogenase complex; LPD-Val; EC 1.8.1.4 from Pseudomonas putida

30% id,
58% cov

A0A0H2ZB32: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

32% id,
54% cov

More...

Dshi_0001: glutamate synthase, small subunit (RefSeq)
is similar to:
PaperBLAST

Q04829: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Haloferax volcanii

24% id,
72% cov

DLDH_THESS / P85207: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Thermus scotoductus

26% id,
39% cov

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

28% id,
35% cov

More...

Dshi_1967: catalytic domain of components of various dehydrogenase complexes (RefSeq)
is similar to:
PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

36% id,
37% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

53% id,
19% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

31% id,
26% cov

Dshi_2264: sarcosine oxidase, alpha subunit family (RefSeq)
is similar to:
PaperBLAST

B6F1A8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Microbacterium luteolum

23% id,
58% cov

DLDH_MYCTU / P9WHH9: Dihydrolipoyl dehydrogenase; LPD; Component of peroxynitrite reductase/peroxidase complex; Component of PNR/P; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Mycobacterium tuberculosis
P9WHH8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis
P9WHH9: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Mycobacterium tuberculosis

26% id,
37% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

24% id,
28% cov

More...

Dshi_3528: geranylgeranyl reductase (RefSeq)
is similar to:
PaperBLAST

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine decarboxylase complex subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Saccharomyces cerevisiae

26% id,
46% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

26% id,
45% cov

DLDH_CORGL / Q8NTE1: Dihydrolipoyl dehydrogenase; LPD; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Corynebacterium glutamicum

40% id,
12% cov

Dshi_2884: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase (RefSeq)
is similar to:
PaperBLAST

acoL: TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Clostridium magnum

29% id,
33% cov

pdhL: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Cupriavidus necator
Q0KBV8: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Cupriavidus necator

39% id,
21% cov

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

27% id,
27% cov

More...

Dshi_4157: monooxygenase protein, putative (RefSeq)
is similar to:
PaperBLAST

DLDH1_PSEPU / P09063: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of branched-chain alpha-keto acid dehydrogenase complex; LPD-Val; EC 1.8.1.4 from Pseudomonas putida

29% id,
33% cov

PfGW456L13_3543: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas fluorescens

49% id,
8% cov

PS417_17560: Dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas simiae

55% id,
7% cov

More...

Dshi_3455: glucose inhibited division protein A (RefSeq)
is similar to:
PaperBLAST

A4V929: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Acidianus ambivalens

24% id,
36% cov

lpdA / O84561: dihydrolipoyl dehydrogenase subunit (EC 1.8.1.4) from Chlamydia trachomatis

28% id,
31% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

28% id,
25% cov

Dshi_3075: Electron-transferring-flavoproteindehydrogenase (RefSeq)
is similar to:
PaperBLAST

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

30% id,
28% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

30% id,
28% cov

DLDH_AZOVI / P18925: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; EC 1.8.1.4 from Azotobacter vinelandii
GI|142325: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Azotobacter vinelandii

29% id,
27% cov

More...

Dshi_2115: sarcosine oxidase, alpha subunit family (RefSeq)
is similar to:
PaperBLAST

P50970: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Zymomonas mobilis

26% id,
32% cov

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

25% id,
30% cov

DLDH_CORGL / Q8NTE1: Dihydrolipoyl dehydrogenase; LPD; Dihydrolipoamide dehydrogenase; E3 component of alpha-ketoacid dehydrogenase complexes; EC 1.8.1.4 from Corynebacterium glutamicum

39% id,
11% cov

More...

Dshi_0125: NADH:flavin oxidoreductase/NADH oxidase (RefSeq)
is similar to:
PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

29% id,
26% cov

A0A0H2ZHZ0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

32% id,
16% cov

pdhD / GB|CAB13334.1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Bacillus subtilis
pdhD / P21880: dihydrolipoyl dehydrogenase component subunit (EC 1.8.1.4) from Bacillus subtilis

45% id,
11% cov

More...

Dshi_2160: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (RefSeq)
is similar to:
PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

38% id,
20% cov

Dshi_2865: succinate dehydrogenase, flavoprotein subunit (RefSeq)
is similar to:
PaperBLAST

DLDH_PSEFL / P14218: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of 2-oxoglutarate dehydrogenase complex; EC 1.8.1.4 from Pseudomonas fluorescens

30% id,
23% cov

Q9I3D1: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa
A0A0H2Z9F5: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Pseudomonas aeruginosa

30% id,
23% cov

lpdG / GI|1256717: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Pseudomonas putida

41% id,
11% cov

Dshi_2159: Transketolase central region (RefSeq)
is similar to:
PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

36% id,
18% cov

Dshi_0053: HI0933 family protein (RefSeq)
is similar to:
PaperBLAST

DLDH_ECOLI / P0A9P0: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; Glycine cleavage system L protein; EC 1.8.1.4 from Escherichia coli
Lpd / b0116: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
lpd / SP|P0A9P1: dihydrolipoyl dehydrogenase; EC 1.8.1.4 from Escherichia coli
lpd / P0A9P0: lipoamide dehydrogenase (EC 1.8.1.4) from Escherichia coli
P0A9P0: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Escherichia coli

36% id,
15% cov

Dshi_0062: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family (RefSeq)
is similar to:
PaperBLAST

DLDH2_ARATH / Q9M5K2: Dihydrolipoyl dehydrogenase 2, mitochondrial; AtmLPD2; mtLPD2; Dihydrolipoamide dehydrogenase 2; Glycine cleavage system L protein 2; Pyruvate dehydrogenase complex E3 subunit 2; E3-2; PDC-E3 2; EC 1.8.1.4 from Arabidopsis thaliana
Q9M5K2: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Arabidopsis thaliana

43% id,
8% cov

Dshi_1396: acetyl-CoA carboxylase, biotin carboxyl carrier protein (RefSeq)
is similar to:
PaperBLAST

lpdA / B3TZD6: dihydrolipoamide dehydrogenase (EC 1.8.1.4) from Advenella kashmirensis

36% id,
9% cov

Dshi_1935: cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq)
is similar to:
PaperBLAST

Q8VPK7: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Streptococcus pneumoniae

43% id,
7% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 21 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

3041704-3043107 (frame +1) on 57145
is similar to:
PaperBLAST

DLDH_HYMDI / P80647: Dihydrolipoyl dehydrogenase; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Hymenolepis diminuta
Also see hits to annotated proteins above

64% id,
100% cov

DLDH_YEAST / P09624: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine decarboxylase complex subunit L; Lipoamide dehydrogenase component of pyruvate dehydrogenase complex; Pyruvate dehydrogenase complex E3 component; EC 1.8.1.4 from Saccharomyces cerevisiae
Also see hits to annotated proteins above

51% id,
96% cov

2386302-2389388 (frame -1) on 57145
is similar to:
PaperBLAST

DLDH_HUMAN / P09622: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; Glycine cleavage system L protein; EC 1.8.1.4 from Homo sapiens
DLD / P09622: dihydrolipoyl dehydrogenase monomer (EC 1.8.1.4) from Homo sapiens
P09622: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Homo sapiens
Also see hits to annotated proteins above

27% id,
27% cov

DLDH_MESAU / Q811C4: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Mesocricetus auratus
Also see hits to annotated proteins above

27% id,
25% cov

DLDH_PIG / P09623: Dihydrolipoyl dehydrogenase, mitochondrial; Dihydrolipoamide dehydrogenase; EC 1.8.1.4 from Sus scrofa
P09623: dihydrolipoyl dehydrogenase (EC 1.8.1.4) from Sus scrofa
Also see hits to annotated proteins above

26% id,
27% cov

More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory