Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 18 curated entries in PaperBLAST's database that match '2.1.1.13' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1073: Methionine synthase (RefSeq) is similar to: | PaperBLAST |
PGA1_c13350: Methionine synthase component, B12 binding and B12-binding cap domains (EC:2.1.1.13) from Phaeobacter inhibens | 84% id, 100% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 33% id, 31% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 37% id, 25% cov |
| Dshi_1680: ferredoxin (RefSeq) is similar to: | PaperBLAST |
PGA1_c15200: ATP-dependent reduction of co(II)balamin (RamA-like) (EC:2.1.1.13) from Phaeobacter inhibens | 70% id, 100% cov |
| Dshi_1074: homocysteine S-methyltransferase (RefSeq) is similar to: | PaperBLAST |
PGA1_c13370: Methionine synthase component, methyltransferase domain (EC:2.1.1.13) from Phaeobacter inhibens | 69% id, 99% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 38% id, 34% cov |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 33% id, 37% cov |
| Dshi_1677: Methionine synthase (RefSeq) is similar to: | PaperBLAST |
PGA1_c16040: Methionine synthase component, pterin-binding domain (EC:2.1.1.13) from Phaeobacter inhibens | 65% id, 99% cov |
DvMF_0476: vitamin B12-dependent methionine synthase without a reactivation domain (EC 2.1.1.13) from Desulfovibrio vulgaris | 35% id, 37% cov |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 35% id, 36% cov |
| Dshi_1070: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
PGA1_c13340: Accessory protein for co(II)balamin reduction (DUF1638) (EC:2.1.1.13) from Phaeobacter inhibens | 67% id, 87% cov |
| Dshi_3928: homocysteine S-methyltransferase (RefSeq) is similar to: | PaperBLAST |
DVU1585: Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) from Desulfovibrio vulgaris | 31% id, 28% cov |
metH / Q8NQD1: cobalamin-dependent methionine synthase (EC 2.1.1.13) from Corynebacterium glutamicum | 27% id, 24% cov |
| Dshi_0776: cobalamin B12-binding domain protein (RefSeq) is similar to: | PaperBLAST |
Q9WYA5: methionine synthase (EC 2.1.1.13) from Thermotoga maritima | 20% id, 26% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory