Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 77 curated entries in PaperBLAST's database that match '2.3.1.31' as complete word(s).

These curated entries have 68 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1593: Homoserine O-succinyltransferase (RefSeq)
is similar to:
PaperBLAST

METAA_CERS4 / Q3J205: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Cereibacter sphaeroides

82% id,
100% cov

METAA_RUEPO / Q5LSN6: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Ruegeria pomeroyi

82% id,
97% cov

METAA_HYPNA / Q0BX37: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Hyphomonas neptunium

61% id,
100% cov

More...

Dshi_1594: alpha/beta hydrolase fold (RefSeq)
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

27% id,
58% cov

Dshi_1646: inosine-5'-monophosphate dehydrogenase (RefSeq)
is similar to:
PaperBLAST

METXA_METEZ / D7E9E0: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanohalobium evestigatum

28% id,
22% cov

METXA_METLZ / A2SQW3: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanocorpusculum labreanum

37% id,
12% cov

METXA_METMS / D5E9R7: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanohalophilus mahii

25% id,
17% cov

More...

Dshi_5003: hypothetical protein (NCBI)
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

49% id,
13% cov

Dshi_1745: putative signal-transduction protein with CBS domains (RefSeq)
is similar to:
PaperBLAST

METXA_METMS / D5E9R7: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanohalophilus mahii

24% id,
25% cov

Dshi_2701: alpha/beta hydrolase fold (RefSeq)
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus

35% id,
14% cov

Dshi_0446: putative signal transduction protein with CBS domains (RefSeq)
is similar to:
PaperBLAST

METXA_METFP / K2QXP6: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanobacterium formicicum

37% id,
12% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1660291-1661274 (frame +1) on 57145
is similar to:
PaperBLAST

METXA_THET2 / Q9RA51: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Thermus thermophilus
Also see hits to annotated proteins above

27% id,
59% cov

434500-434973 (frame +1) on 57145
is similar to:
PaperBLAST

METXA_METPE / B8GHE0: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanosphaerula palustris

32% id,
24% cov

METXA_METVS / A6UNL1: Homoserine O-acetyltransferase; HAT; Homoserine transacetylase; HTA; EC 2.3.1.31 from Methanococcus vannielii

27% id,
13% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory