Curated BLAST for Genomes


Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 16 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_3565: arginine biosynthesis bifunctional protein ArgJ (RefSeq)
is similar to:

argJ: glutamate N-acetyltransferase/amino-acid acetyltransferase; EC from Neisseria gonorrhoeae

46% id,
97% cov

GNAT2_STRCL / P0DJQ5: Glutamate N-acetyltransferase 2; Ornithine acetyltransferase 2; Ornithine transacetylase 2; OATase 2; EC from Streptomyces clavuligerus
P0DJQ5: glutamate N-acetyltransferase (EC from Streptomyces clavuligerus

42% id,
99% cov

DVU0823: Glutamate N-acetyltransferase (EC from Desulfovibrio vulgaris

41% id,
99% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory