Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 26 curated entries in PaperBLAST's database that match '2.3.1.8' as complete word(s).

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1825: phosphate acetyltransferase (RefSeq)
is similar to:
PaperBLAST

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

56% id,
98% cov

Q5LMK3: phosphate acetyltransferase (EC 2.3.1.8) from Ruegeria pomeroyi

56% id,
97% cov

O52593: phosphate acetyltransferase (EC 2.3.1.8) from Hungateiclostridium thermocellum

44% id,
99% cov

More...

Dshi_0633: Phosphate butyryltransferase (RefSeq)
is similar to:
PaperBLAST

CH_090885: phosphate acetyltransferase; EC 2.3.1.8 from Thermotoga maritima

38% id,
94% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

26% id,
100% cov

EUTD_SALTY / P41790: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; Phosphotransacetylase EutD; PATC EutD; EC 2.3.1.8 from Salmonella typhimurium
P41790: phosphate acetyltransferase (EC 2.3.1.8) from Salmonella enterica

26% id,
93% cov

More...

Dshi_3467: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase (RefSeq)
is similar to:
PaperBLAST

pta / P71103: phosphate acetyltransferase (EC 2.3.1.8) from Clostridium acetobutylicum

30% id,
98% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

29% id,
100% cov

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum

30% id,
96% cov

More...

Dshi_0826: malic protein NAD-binding (RefSeq)
is similar to:
PaperBLAST

PTAS_CORGL / P77844: Phosphate acetyltransferase; Phosphotransacetylase; EC 2.3.1.8 from Corynebacterium glutamicum

29% id,
98% cov

pta / A3SR26: phosphate acetyltransferase (EC 2.3.1.8) from Roseovarius nubinhibens

26% id,
97% cov

EUTD_ECOLI / P77218: Phosphate acetyltransferase EutD; Ethanolamine utilization protein EutD; EC 2.3.1.8 from Escherichia coli
YpfA / b2458: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli
eutD / P77218: phosphate acetyltransferase EutD (EC 2.3.1.8) from Escherichia coli

26% id,
95% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory