Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 1 curated entries in PaperBLAST's database that match '2.3.1.89' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_0006: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (RefSeq) is similar to: | PaperBLAST |
DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis | 34% id, 61% cov |
Dshi_1502: acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase (RefSeq) is similar to: | PaperBLAST |
DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis | 30% id, 50% cov |
Dshi_4149: transferase hexapeptide repeat containing protein (RefSeq) is similar to: | PaperBLAST |
DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis | 53% id, 23% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
76618-77193 (frame -1) on 57149 is similar to: | PaperBLAST |
DAPH_BACSU / O34981: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase; EC 2.3.1.89 from Bacillus subtilis | 27% id, 58% cov |
Lawrence Berkeley National Laboratory