Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 133 curated entries in PaperBLAST's database that match '2.3.1.9'.

These curated entries have 105 distinct sequences.

Running ublast with E ≤ 0.01

Found 10 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_3066: acetyl-CoA acetyltransferase (RefSeq)
is similar to:
PaperBLAST

PGA1_c03400: acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) from Phaeobacter inhibens

91% id,
100% cov

THIL_RHIME / P50174: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Rhizobium meliloti
SMc03879: Acetyl-CoA acetyltransferase (EC 2.3.1.9) from Sinorhizobium meliloti

74% id,
100% cov

THIL_SHIZO / P07097: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Beta-ketothiolase; EC 2.3.1.9 from Shinella zoogloeoides

73% id,
98% cov

More...

Dshi_3331: acetyl-CoA acetyltransferase (RefSeq)
is similar to:
PaperBLAST

BKTB_CUPNH / Q0KBP1: Beta-ketothiolase BktB; Acetyl-CoA acetyltransferase; Acetyl-CoA acyltransferase; EC 2.3.1.16; EC 2.3.1.9 from Cupriavidus necator
bktB / Q0KBP1: β-ketothiolase (EC 2.3.1.16; EC 2.3.1.9) from Cupriavidus necator

60% id,
100% cov

PfGW456L13_2411: Acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pseudomonas fluorescens

60% id,
99% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
P76461: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Escherichia coli

50% id,
99% cov

More...

Dshi_0074: acetyl-CoA acetyltransferase (RefSeq)
is similar to:
PaperBLAST

AO353_25685: acetyl-CoA:acetyl-CoA C-acetyltransferase / acetyl-CoA:propanoyl-CoA 2-C-acetyltransferase (EC 2.3.1.9; EC 2.3.1.16) from Pseudomonas fluorescens

62% id,
97% cov

ACCT2_ARATH / Q8S4Y1: Acetyl-CoA acetyltransferase 2; Acetoacetyl-CoA thiolase 2; Thiolase 2; Protein EMBRYO DEFECTIVE 1276; EC 2.3.1.9 from Arabidopsis thaliana
Q8S4Y1: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Arabidopsis thaliana

51% id,
97% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
P76461: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Escherichia coli

50% id,
99% cov

More...

Dshi_3817: beta-ketoadipyl CoA thiolase (RefSeq)
is similar to:
PaperBLAST

AO356_21640: acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] from Pseudomonas fluorescens

45% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
P76461: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Escherichia coli

45% id,
99% cov

THLA_SYNWW / Q0AVM3: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; EC 2.3.1.9 from Syntrophomonas wolfei

45% id,
99% cov

More...

Dshi_0836: acetyl-CoA acetyltransferase (RefSeq)
is similar to:
PaperBLAST

Q0KAI3: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Cupriavidus necator

38% id,
100% cov

AtoB / b2224: acetyl-CoA acetyltransferase (EC 2.3.1.16; EC 2.3.1.9) from Escherichia coli
P76461: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Escherichia coli

37% id,
100% cov

AO356_21640: acetyl-CoA C-acetyltransferase [EC: 2.3.1.9] from Pseudomonas fluorescens

36% id,
100% cov

More...

Dshi_1147: processing peptidase (RefSeq)
is similar to:
PaperBLAST

P07256: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Zoogloea ramigera

21% id,
95% cov

Dshi_1963: Beta-ketoacyl synthase (RefSeq)
is similar to:
PaperBLAST

ERG10_CANAL / A0A1D8PH52: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; Ergosterol biosynthesis protein 10; EC 2.3.1.9 from Candida albicans

28% id,
54% cov

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

31% id,
29% cov

ERYA1_SACER / Q03131: 6-deoxyerythronolide-B synthase EryA1, modules 1 and 2; DEBS 1; 6-deoxyerythronolide B synthase I; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03131: 6-deoxyerythronolide-B synthase (subunit 3/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

30% id,
30% cov

More...

Dshi_1962: Beta-ketoacyl synthase (RefSeq)
is similar to:
PaperBLAST

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea

29% id,
31% cov

ERYA1_SACER / Q03131: 6-deoxyerythronolide-B synthase EryA1, modules 1 and 2; DEBS 1; 6-deoxyerythronolide B synthase I; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03131: 6-deoxyerythronolide-B synthase (subunit 3/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

28% id,
27% cov

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

35% id,
11% cov

More...

Dshi_2180: Beta-ketoacyl synthase (RefSeq)
is similar to:
PaperBLAST

A4YEH9: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Metallosphaera sedula

31% id,
26% cov

B1YB71: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Pyrobaculum neutrophilum

34% id,
24% cov

THL_BACSU / P45855: Acetyl-CoA acetyltransferase; Acetoacetyl-CoA thiolase; EC 2.3.1.9 from Bacillus subtilis

24% id,
24% cov

More...

Dshi_1616: Beta-ketoacyl synthase (RefSeq)
is similar to:
PaperBLAST

ERYA2_SACER / Q03132: 6-deoxyerythronolide-B synthase EryA2, modules 3 and 4; DEBS 2; 6-deoxyerythronolide B synthase II; Erythronolide synthase; ORF B; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03132: 6-deoxyerythronolide-B synthase (subunit 2/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

30% id,
12% cov

ERYA3_SACER / Q03133: 6-deoxyerythronolide-B synthase EryA3, modules 5 and 6; DEBS 3; 6-deoxyerythronolide B synthase III; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03133: 6-deoxyerythronolide-B synthase (EC 2.3.1.94) from Saccharopolyspora erythraea

29% id,
12% cov

ERYA1_SACER / Q03131: 6-deoxyerythronolide-B synthase EryA1, modules 1 and 2; DEBS 1; 6-deoxyerythronolide B synthase I; Erythronolide synthase; ORF C; EC 2.3.1.94 from Saccharopolyspora erythraea
Q03131: 6-deoxyerythronolide-B synthase (subunit 3/3) (EC 2.3.1.94) from Saccharopolyspora erythraea

27% id,
10% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 11 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1173723-1175075 (frame +3) on 57145
is similar to:
PaperBLAST

P07256: acetyl-CoA C-acetyltransferase (EC 2.3.1.9) from Zoogloea ramigera
Also see hits to annotated proteins above

21% id,
98% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory