Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 107 curated entries in PaperBLAST's database that match '2.4.1.13' as complete word(s).
These curated entries have 69 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_3241: glycosyl transferase group 1 (RefSeq) is similar to: | PaperBLAST |
SUS_MELRP / I7A3T6: Sucrose synthase; SuSyMr; EC 2.4.1.13 from Melioribacter roseus | 29% id, 12% cov |
| Dshi_1951: secretion protein HlyD family protein (RefSeq) is similar to: | PaperBLAST |
BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13) | 45% id, 4% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 75911-79942 (frame -3) on 57147 is similar to: | PaperBLAST |
BAA88904.1: sucrose synthase (CitSUSA) (EC 2.4.1.13) | 26% id, 16% cov |
CAA03935.1: Sucrose synthase type 2 (EC 2.4.1.13) | 29% id, 14% cov |
BAB20799.1: sucrose synthase 1 (Sus1;PypSUS1) (EC 2.4.1.13) | 28% id, 14% cov |
| 555861-556415 (frame +3) on 57145 is similar to: | PaperBLAST |
BAA08304.1: sucrose-phosphate synthase (Sps1) (EC 2.4.1.13) | 52% id, 4% cov |
Lawrence Berkeley National Laboratory