Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 25 curated entries in PaperBLAST's database that match '2.4.1.7' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1824: alpha amylase catalytic region (RefSeq)
is similar to:
PaperBLAST

AAC74391.2: sucrose phosphorylase (YcjM) (EC 2.4.1.7)

38% id,
94% cov

AAO21868.1: sucrose phosphorylase (LaSP;GtfA2;LBA1437) (EC 2.4.1.7)

29% id,
99% cov

AAD40317.1: sucrose phosphorylase (EC 2.4.1.7)

30% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory