Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 80 curated entries in PaperBLAST's database that match '2.5.1.47' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_2314: Pyridoxal-5'-phosphate-dependent protein beta subunit (RefSeq)
is similar to:
PaperBLAST

A0A0F6AQU1: cysteine synthase (EC 2.5.1.47) from Brucella abortus

71% id,
96% cov

CYSK_SCHPO / O59701: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Schizosaccharomyces pombe

54% id,
90% cov

CYSK_EMENI / P50867: Cysteine synthase 1; CS 1; O-acetylserine (thiol)-lyase 1; OAS-TL 1; O-acetylserine sulfhydrylase 1; O-succinylserine sulfhydrylase; EC 2.5.1.-; EC 2.5.1.47 from Emericella nidulans
cysB / GB|AAC06128.1: cysteine synthase; EC 2.5.1.47 from Emericella nidulans

53% id,
89% cov

More...

Dshi_0891: cysteine synthase A (RefSeq)
is similar to:
PaperBLAST

DCSD_STRLA / D2Z027: O-ureido-L-serine synthase; Cysteine synthase homolog DscD; O-acetylserine sulfhydrylase; EC 2.6.99.3; EC 2.5.1.47 from Streptomyces lavendulae
dcsD / D2Z027: O-ureido-L-serine synthase (EC 2.5.1.47; EC 2.6.99.3) from Streptomyces lavendulae
D2Z027: cysteine synthase (EC 2.5.1.47); O-ureido-L-serine synthase (EC 2.6.99.3) from Streptomyces lavendulae

48% id,
98% cov

Q84IF9: cysteine synthase (EC 2.5.1.47); L-3-cyanoalanine synthase (EC 4.4.1.9) from Geobacillus stearothermophilus

47% id,
99% cov

E5LPF4: cysteine synthase (EC 2.5.1.47) from Lacticaseibacillus casei

46% id,
97% cov

More...

Dshi_0793: O-acetylhomoserine/O-acetylserine sulfhydrylase (RefSeq)
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

44% id,
99% cov

Dshi_2951: Pyridoxal-5'-phosphate-dependent protein beta subunit (RefSeq)
is similar to:
PaperBLAST

A4HPM6: cysteine synthase (EC 2.5.1.47) from Leishmania braziliensis

27% id,
93% cov

DCSD_STRLA / D2Z027: O-ureido-L-serine synthase; Cysteine synthase homolog DscD; O-acetylserine sulfhydrylase; EC 2.6.99.3; EC 2.5.1.47 from Streptomyces lavendulae
dcsD / D2Z027: O-ureido-L-serine synthase (EC 2.5.1.47; EC 2.6.99.3) from Streptomyces lavendulae
D2Z027: cysteine synthase (EC 2.5.1.47); O-ureido-L-serine synthase (EC 2.6.99.3) from Streptomyces lavendulae

27% id,
94% cov

P45040: cysteine synthase (EC 2.5.1.47) from Haemophilus influenzae

25% id,
94% cov

More...

Dshi_0888: Pyridoxal-5'-phosphate-dependent protein beta subunit (RefSeq)
is similar to:
PaperBLAST

Cy-OASTL / A0A2Z6G0Q7: mimosine synthase monomer (EC 2.5.1.47; EC 2.5.1.52) from Leucaena leucocephala
A0A2Z6G0Q7: cysteine synthase (EC 2.5.1.47) from Leucaena leucocephala

25% id,
87% cov

Dshi_2702: Pyridoxal-5'-phosphate-dependent protein beta subunit (RefSeq)
is similar to:
PaperBLAST

CYSK_BACSU / P37887: Cysteine synthase; CSase; O-acetylserine (thiol)-lyase; OAS-TL; Superoxide-inducible protein 11; SOI11; EC 2.5.1.47 from Bacillus subtilis
P37887: cysteine synthase (EC 2.5.1.47) from Bacillus subtilis

27% id,
77% cov

Q84IF9: cysteine synthase (EC 2.5.1.47); L-3-cyanoalanine synthase (EC 4.4.1.9) from Geobacillus stearothermophilus

27% id,
69% cov

Dshi_2410: O-succinylhomoserine sulfhydrylase (RefSeq)
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

34% id,
51% cov

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

30% id,
41% cov

Dshi_1002: Cystathionine gamma-synthase (RefSeq)
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

33% id,
51% cov

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

34% id,
37% cov

METW_YEAST / Q12198: Homocysteine/cysteine synthase; Hydrogen sulfide utilizing 1; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

29% id,
40% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory