Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 28 curated entries in PaperBLAST's database that match '2.5.1.54' as complete word(s).
These curated entries have 22 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1526: phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) is similar to: | PaperBLAST |
AROG2_PETHY / A0A067XGX8: Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2; DAHP synthase 2; PhDAHP2; Phospho-2-keto-3-deoxyheptonate aldolase 2; EC 2.5.1.54 from Petunia hybrida | 56% id, 87% cov |
O68903: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Actinosynnema pretiosum | 51% id, 95% cov |
P29976: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Arabidopsis thaliana | 55% id, 86% cov |
| Dshi_0583: 2-dehydro-3-deoxyphosphooctonate aldolase (RefSeq) is similar to: | PaperBLAST |
Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Aeropyrum pernix | 29% id, 91% cov |
P39912: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54); chorismate mutase (EC 5.4.99.5) from Bacillus subtilis | 29% id, 67% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 574077-574958 (frame -1) on 57145 is similar to: | PaperBLAST |
Q9YEJ7: 3-deoxy-7-phosphoheptulonate synthase (EC 2.5.1.54) from Aeropyrum pernix | 28% id, 96% cov |
Lawrence Berkeley National Laboratory