Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 88 curated entries in PaperBLAST's database that match '2.6.1.5'.

These curated entries have 64 distinct sequences.

Running ublast with E ≤ 0.01

Found 28 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_3317: phosphoserine aminotransferase (RefSeq)
is similar to:
PaperBLAST

SERC_METBF / P52878: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Methanosarcina barkeri
P52878: phosphoserine transaminase (EC 2.6.1.52) from Methanosarcina barkeri

62% id,
99% cov

serC / Q8TNI1: phosphoserine aminotransferase monomer (EC 2.6.1.52; EC 2.6.1.1) from Methanosarcina acetivorans

62% id,
99% cov

Dshi_2489: Serine--glyoxylate transaminase (RefSeq)
is similar to:
PaperBLAST

SGAT_ARATH / Q56YA5: Serine--glyoxylate aminotransferase; Alanine--glyoxylate aminotransferase; AGT; Asparagine aminotransferase; Serine--pyruvate aminotransferase; EC 2.6.1.45; EC 2.6.1.44; EC 2.6.1.-; EC 2.6.1.51 from Arabidopsis thaliana

48% id,
96% cov

P74281: phosphoserine transaminase (EC 2.6.1.52) from Synechocystis sp.

38% id,
98% cov

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

37% id,
96% cov

More...

Dshi_0145: Aspartate transaminase (RefSeq)
is similar to:
PaperBLAST

PGA1_c29420: aromatic-amino-acid transaminase [EC:2.6.1.57] from Phaeobacter inhibens

46% id,
99% cov

TYRB_PARDE / P95468: Aromatic-amino-acid aminotransferase; ARAT; AROAT; EC 2.6.1.57 from Paracoccus denitrificans
P95468: aromatic-amino-acid transaminase (EC 2.6.1.57) from Paracoccus denitrificans

45% id,
99% cov

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

42% id,
100% cov

More...

Dshi_0887: Serine--glyoxylate transaminase (RefSeq)
is similar to:
PaperBLAST

SGAT_ARATH / Q56YA5: Serine--glyoxylate aminotransferase; Alanine--glyoxylate aminotransferase; AGT; Asparagine aminotransferase; Serine--pyruvate aminotransferase; EC 2.6.1.45; EC 2.6.1.44; EC 2.6.1.-; EC 2.6.1.51 from Arabidopsis thaliana

46% id,
96% cov

P74281: phosphoserine transaminase (EC 2.6.1.52) from Synechocystis sp.

36% id,
98% cov

SAT_THEMA / Q9X1C0: Serine-pyruvate aminotransferase; SAT; EC 2.6.1.51 from Thermotoga maritima

34% id,
96% cov

More...

Dshi_3325: aminotransferase class V (RefSeq)
is similar to:
PaperBLAST

SGAT_ARATH / Q56YA5: Serine--glyoxylate aminotransferase; Alanine--glyoxylate aminotransferase; AGT; Asparagine aminotransferase; Serine--pyruvate aminotransferase; EC 2.6.1.45; EC 2.6.1.44; EC 2.6.1.-; EC 2.6.1.51 from Arabidopsis thaliana

45% id,
98% cov

SAT_THEMA / Q9X1C0: Serine-pyruvate aminotransferase; SAT; EC 2.6.1.51 from Thermotoga maritima

40% id,
96% cov

P74281: phosphoserine transaminase (EC 2.6.1.52) from Synechocystis sp.

38% id,
98% cov

More...

Dshi_0762: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

41% id,
95% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

37% id,
97% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

35% id,
91% cov

More...

Dshi_2946: histidinol-phosphate aminotransferase (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

41% id,
92% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

29% id,
77% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

28% id,
77% cov

Dshi_2090: Serine--glyoxylate transaminase (RefSeq)
is similar to:
PaperBLAST

SGAT_ARATH / Q56YA5: Serine--glyoxylate aminotransferase; Alanine--glyoxylate aminotransferase; AGT; Asparagine aminotransferase; Serine--pyruvate aminotransferase; EC 2.6.1.45; EC 2.6.1.44; EC 2.6.1.-; EC 2.6.1.51 from Arabidopsis thaliana

36% id,
96% cov

P74281: phosphoserine transaminase (EC 2.6.1.52) from Synechocystis sp.

32% id,
100% cov

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

31% id,
98% cov

More...

Dshi_1446: aminotransferase class-III (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

37% id,
90% cov

Dshi_2088: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

33% id,
100% cov

Dshi_3301: branched-chain amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

35% id,
91% cov

Dshi_1168: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

33% id,
92% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

30% id,
97% cov

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

30% id,
91% cov

More...

Dshi_3343: aminotransferase class-III (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

32% id,
91% cov

Dshi_1366: aminotransferase class-III (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

31% id,
92% cov

Dshi_2837: aminotransferase class IV (RefSeq)
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

30% id,
95% cov

Dshi_0798: acetylornithine and succinylornithine aminotransferase (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

31% id,
90% cov

Dshi_2042: aminotransferase class-III (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

30% id,
88% cov

Dshi_1296: DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq)
is similar to:
PaperBLAST

Q4R0W2: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces ribosidificus

30% id,
87% cov

Q53U20: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase (EC 2.6.1.101); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces fradiae

31% id,
72% cov

GLSA_STRGR / P77952: L-glutamine:scyllo-inosose aminotransferase; Glutamine--scyllo-inositol transaminase; EC 2.6.1.50 from Streptomyces griseus
stsC / P77952: L:glutamine:2-keto-myo-inositol aminotransferase subunit (EC 2.6.1.50) from Streptomyces griseus

31% id,
70% cov

Dshi_2228: DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq)
is similar to:
PaperBLAST

WECE_ECOLI / P27833: dTDP-4-amino-4,6-dideoxygalactose transaminase; EC 2.6.1.59 from Escherichia coli
Rff / b3791: dTDP-4-dehydro-6-deoxy-D-glucose transaminase (EC 2.6.1.59) from Escherichia coli
wecE / P27833: dTDP-4-dehydro-6-deoxy-D-glucose transaminase (EC 2.6.1.59) from Escherichia coli
P27833: dTDP-4-amino-4,6-dideoxygalactose transaminase (EC 2.6.1.59) from Escherichia coli

29% id,
88% cov

GLSA_STRGR / P77952: L-glutamine:scyllo-inosose aminotransferase; Glutamine--scyllo-inositol transaminase; EC 2.6.1.50 from Streptomyces griseus
stsC / P77952: L:glutamine:2-keto-myo-inositol aminotransferase subunit (EC 2.6.1.50) from Streptomyces griseus

29% id,
86% cov

Dshi_1835: transcriptional regulator, GntR family with aminotransferase domain (RefSeq)
is similar to:
PaperBLAST

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

28% id,
93% cov

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

28% id,
76% cov

AATR3_SCHPO / Q9Y7S6: Aromatic amino acid aminotransferase C569.07; EC 2.6.1.57 from Schizosaccharomyces pombe

24% id,
73% cov

More...

Dshi_2044: transcriptional regulator, GntR family with aminotransferase domain (RefSeq)
is similar to:
PaperBLAST

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

26% id,
93% cov

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

29% id,
73% cov

AATR2_SCHPO / O94570: Aromatic amino acid aminotransferase C1773.13; EC 2.6.1.57 from Schizosaccharomyces pombe

27% id,
75% cov

More...

Dshi_0060: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

26% id,
89% cov

Dshi_0166: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

28% id,
83% cov

Dshi_1794: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

26% id,
87% cov

A0A0A7DQ59: tyrosine transaminase (EC 2.6.1.5) from Scutellaria baicalensis

27% id,
69% cov

ATTY_RAT / P04694: Tyrosine aminotransferase; TAT; L-tyrosine:2-oxoglutarate aminotransferase; EC 2.6.1.5 from Rattus norvegicus

27% id,
45% cov

More...

Dshi_0609: transcriptional regulator, GntR family with aminotransferase domain (RefSeq)
is similar to:
PaperBLAST

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

28% id,
73% cov

Dshi_0178: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

22% id,
91% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

25% id,
58% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

31% id,
18% cov

Dshi_2393: aminotransferase family protein, putative (RefSeq)
is similar to:
PaperBLAST

P74281: phosphoserine transaminase (EC 2.6.1.52) from Synechocystis sp.

29% id,
54% cov

Dshi_4206: aminotransferase class IV (RefSeq)
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

34% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 28 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

601696-603381 (frame +1) on 57145
is similar to:
PaperBLAST

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis
Also see hits to annotated proteins above

25% id,
89% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory