Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 33 curated entries in PaperBLAST's database that match '2.6.1.57'.

These curated entries have 27 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_0145: Aspartate transaminase (RefSeq)
is similar to:
PaperBLAST

PGA1_c29420: aromatic-amino-acid transaminase [EC:2.6.1.57] from Phaeobacter inhibens

46% id,
99% cov

TYRB_PARDE / P95468: Aromatic-amino-acid aminotransferase; ARAT; AROAT; EC 2.6.1.57 from Paracoccus denitrificans
P95468: aromatic-amino-acid transaminase (EC 2.6.1.57) from Paracoccus denitrificans

45% id,
99% cov

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

42% id,
100% cov

More...

Dshi_0762: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

41% id,
95% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

37% id,
97% cov

Q9RAT0: aromatic-amino-acid transaminase (EC 2.6.1.57) from Lactococcus lactis

35% id,
91% cov

Dshi_2946: histidinol-phosphate aminotransferase (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

41% id,
92% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

29% id,
77% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

28% id,
77% cov

Dshi_2088: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

33% id,
100% cov

Dshi_3301: branched-chain amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

35% id,
91% cov

Dshi_1168: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

33% id,
92% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

30% id,
97% cov

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

30% id,
91% cov

Dshi_2837: aminotransferase class IV (RefSeq)
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

30% id,
95% cov

Dshi_1835: transcriptional regulator, GntR family with aminotransferase domain (RefSeq)
is similar to:
PaperBLAST

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

28% id,
93% cov

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

28% id,
76% cov

AATR3_SCHPO / Q9Y7S6: Aromatic amino acid aminotransferase C569.07; EC 2.6.1.57 from Schizosaccharomyces pombe

24% id,
73% cov

Dshi_2044: transcriptional regulator, GntR family with aminotransferase domain (RefSeq)
is similar to:
PaperBLAST

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

26% id,
93% cov

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

29% id,
73% cov

AATR2_SCHPO / O94570: Aromatic amino acid aminotransferase C1773.13; EC 2.6.1.57 from Schizosaccharomyces pombe

27% id,
75% cov

More...

Dshi_0060: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

26% id,
89% cov

Dshi_0166: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

28% id,
83% cov

Dshi_1794: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

26% id,
87% cov

Dshi_0609: transcriptional regulator, GntR family with aminotransferase domain (RefSeq)
is similar to:
PaperBLAST

Ac3H11_1015: Aromatic-amino-acid aminotransferase (EC 2.6.1.57) from Acidovorax sp.

28% id,
73% cov

Dshi_0178: aminotransferase class I and II (RefSeq)
is similar to:
PaperBLAST

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

22% id,
91% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

25% id,
58% cov

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

31% id,
18% cov

Dshi_4206: aminotransferase class IV (RefSeq)
is similar to:
PaperBLAST

IlvE / b3770: branched-chain-amino-acid aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.42; EC 2.6.1.6) from Escherichia coli

34% id,
41% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

601696-603381 (frame +1) on 57145
is similar to:
PaperBLAST

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis
Also see hits to annotated proteins above

25% id,
89% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory