Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 13 curated entries in PaperBLAST's database that match '2.7.1.178' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1242: 2-dehydro-3-deoxygalactonokinase (RefSeq) is similar to: | PaperBLAST |
YidV / b3693: 2-dehydro-3-deoxygalactonokinase (EC 2.7.1.178; EC 2.7.1.58) from Escherichia coli | 35% id, 97% cov |
| Dshi_1268: PfkB domain protein (RefSeq) is similar to: | PaperBLAST |
YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli | 26% id, 99% cov |
| Dshi_1976: PfkB domain protein (RefSeq) is similar to: | PaperBLAST |
kdgK / Q9WXS2: 2-keto-3-deoxygluconate kinase (EC 2.7.1.178) from Thermotoga maritima | 25% id, 89% cov |
KDGK_SACS2 / Q97U29: 2-dehydro-3-deoxygluconokinase/2-dehydro-3-deoxygalactonokinase; 2-dehydro-3-deoxyglucono/galactono-kinase; 2-keto-3-deoxy-galactonokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; KDGal kinase; EC 2.7.1.178 from Saccharolobus solfataricus | 22% id, 90% cov |
| Dshi_1621: PfkB domain protein (RefSeq) is similar to: | PaperBLAST |
YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli | 28% id, 57% cov |
kdgK / P45416: 2-dehydro-3-deoxy-D-gluconate kinase (EC 2.7.1.178) from Dickeya dadantii | 33% id, 25% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory