Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1655: Glucokinase (RefSeq)
is similar to:
PaperBLAST

Dshi_1655: glucokinase (EC 2.7.1.2) from Dinoroseobacter shibae

100% id,
100% cov

PS417_22685: Glucokinase (EC 2.7.1.2) from Pseudomonas simiae

33% id,
98% cov

PGA1_c05420: glucokinase (EC 2.7.1.2) from Phaeobacter inhibens

33% id,
98% cov

More...

Dshi_2001: ROK family protein (RefSeq)
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

30% id,
97% cov

GLK_THEMA / Q9X1I0: Glucokinase; ATP-dependent glucokinase; ATP-GLK; Glucose kinase; EC 2.7.1.2 from Thermotoga maritima

32% id,
84% cov

glcK / GI|1303865: glucokinase; EC 2.7.1.2 from Bacillus subtilis

27% id,
97% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory