Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 207 curated entries in PaperBLAST's database that match '2.7.1.4'.

These curated entries have 161 distinct sequences.

Running ublast with E ≤ 0.01

Found 19 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_2797: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

100% id,
100% cov

frk / GB|AAB52373.1: fructokinase; EC 2.7.1.4 from Rhizobium leguminosarum

52% id,
86% cov

AO353_25910: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

37% id,
99% cov

More...

Dshi_0915: phosphomethylpyrimidine kinase (RefSeq)
is similar to:
PaperBLAST

Q5SKG3: hydroxymethylpyrimidine kinase (EC 2.7.1.49); phosphooxymethylpyrimidine kinase (EC 2.7.4.7) from Thermus thermophilus

52% id,
100% cov

THID_SALTY / P55882: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase; EC 2.7.1.49; EC 2.7.4.7 from Salmonella typhimurium
P55882: hydroxymethylpyrimidine kinase (EC 2.7.1.49); phosphooxymethylpyrimidine kinase (EC 2.7.4.7) from Salmonella enterica

51% id,
98% cov

THID_ECOLI / P76422: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase; EC 2.7.1.49; EC 2.7.4.7 from Escherichia coli
ThiJ / b2103: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.7.4.7) from Escherichia coli
thiD / P76422: bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.7.4.7) from Escherichia coli
P76422: hydroxymethylpyrimidine kinase (EC 2.7.1.49); phosphooxymethylpyrimidine kinase (EC 2.7.4.7) from Escherichia coli

51% id,
98% cov

More...

Dshi_0555: FGGY-family pentulose kinase (RefSeq)
is similar to:
PaperBLAST

FGGY_HUMAN / Q96C11: FGGY carbohydrate kinase domain-containing protein; D-ribulokinase FGGY; EC 2.7.1.47 from Homo sapiens
FGGY / Q96C11: FGGY carbohydrate kinase domain-containing protein (EC 2.7.1.47) from Homo sapiens
Q96C11: D-ribulokinase (EC 2.7.1.47) from Homo sapiens

45% id,
97% cov

YDR09_YEAST / Q04585: D-ribulokinase YDR109C; EC 2.7.1.47 from Saccharomyces cerevisiae
YDR109C / Q04585: D-ribulokinase (EC 2.7.1.47) from Saccharomyces cerevisiae
Q04585: D-ribulokinase (EC 2.7.1.47) from Saccharomyces cerevisiae

35% id,
77% cov

Dshi_0228: pyruvate kinase (RefSeq)
is similar to:
PaperBLAST

KPYK_MYCTU / P9WKE5: Pyruvate kinase; PK; EC 2.7.1.40 from Mycobacterium tuberculosis
P9WKE5: pyruvate kinase (EC 2.7.1.40) from Mycobacterium tuberculosis

42% id,
98% cov

Q46078: pyruvate kinase (EC 2.7.1.40) from Corynebacterium glutamicum

42% id,
97% cov

A0A0H3JER5: pyruvate kinase (EC 2.7.1.40) from Escherichia coli

40% id,
100% cov

More...

Dshi_1304: Enoyl-CoA hydratase/isomerase (RefSeq)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

33% id,
97% cov

Dshi_1753: Enoyl-CoA hydratase/isomerase (RefSeq)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

31% id,
99% cov

Dshi_1976: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

33% id,
89% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

33% id,
89% cov

RR42_RS28860: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus basilensis

30% id,
87% cov

More...

Dshi_1268: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

29% id,
98% cov

Q0K080: dehydrogluconokinase (EC 2.7.1.13); 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) from Cupriavidus necator

29% id,
97% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

29% id,
97% cov

More...

Dshi_0537: carbohydrate kinase FGGY (RefSeq)
is similar to:
PaperBLAST

FGGY_HUMAN / Q96C11: FGGY carbohydrate kinase domain-containing protein; D-ribulokinase FGGY; EC 2.7.1.47 from Homo sapiens
FGGY / Q96C11: FGGY carbohydrate kinase domain-containing protein (EC 2.7.1.47) from Homo sapiens
Q96C11: D-ribulokinase (EC 2.7.1.47) from Homo sapiens

30% id,
96% cov

YDR09_YEAST / Q04585: D-ribulokinase YDR109C; EC 2.7.1.47 from Saccharomyces cerevisiae
YDR109C / Q04585: D-ribulokinase (EC 2.7.1.47) from Saccharomyces cerevisiae
Q04585: D-ribulokinase (EC 2.7.1.47) from Saccharomyces cerevisiae

25% id,
49% cov

Dshi_3022: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

KDGK_THET8 / Q53W83: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Thermus thermophilus

28% id,
88% cov

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

30% id,
78% cov

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

27% id,
87% cov

More...

Dshi_1235: xylulokinase (RefSeq)
is similar to:
PaperBLAST

PSK_SYNE7 / Q31KC7: D-ribulose kinase; D-ribulokinase; Probable sugar kinase; SePSK; EC 2.7.1.47 from Synechococcus elongatus

23% id,
98% cov

Dshi_1547: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

frk / GB|AAB52373.1: fructokinase; EC 2.7.1.4 from Rhizobium leguminosarum

25% id,
79% cov

G4T023: fructokinase (EC 2.7.1.4) from Methylotuvimicrobium alcaliphilum

41% id,
20% cov

Shewana3_0069: Fructokinase (EC 2.7.1.4) from Shewanella sp.

29% id,
25% cov

Dshi_1621: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

KDGK_ECOLI / P37647: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Escherichia coli
YhjI / b3526: 2-dehydro-3-deoxygluconokinase (EC 2.7.1.178; EC 2.7.1.45) from Escherichia coli

28% id,
57% cov

KDGK_ECOLW / E0J5J4: 2-dehydro-3-deoxygluconokinase; 2-keto-3-deoxygluconokinase; 3-deoxy-2-oxo-D-gluconate kinase; KDG kinase; EC 2.7.1.45 from Escherichia coli

28% id,
57% cov

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

35% id,
36% cov

More...

Dshi_0831: uracil phosphoribosyltransferase (RefSeq)
is similar to:
PaperBLAST

UKL1_ARATH / Q9FKS0: Uridine/cytidine kinase UKL1, chloroplastic; AtUK; Uridine kinase-like protein 1; Uridine/cytidine kinase 1; EC 2.7.1.48 from Arabidopsis thaliana
Q9FKS0: uracil phosphoribosyltransferase (EC 2.4.2.9); uridine/cytidine kinase (EC 2.7.1.48) from Arabidopsis thaliana

33% id,
40% cov

UKL3_ARATH / Q8VYB2: Uridine kinase-like protein 3; EC 2.7.1.48; EC 2.4.2.9 from Arabidopsis thaliana

31% id,
41% cov

UKL2_ARATH / Q9LK34: Uridine/cytidine kinase UKL1, chloroplastic; Uridine kinase-like protein 2; Uridine/cytidine kinase 2; EC 2.7.1.48 from Arabidopsis thaliana

33% id,
40% cov

More...

Dshi_0908: transcriptional activator, TenA family (RefSeq)
is similar to:
PaperBLAST

THI22_SCHPO / O94266: Putative hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 2; Hydroxymethylpyrimidine kinase 2; HMP kinase 2; Hydroxymethylpyrimidine phosphate kinase 2; HMP-P kinase 2; HMP-phosphate kinase 2; HMPP kinase 2; EC 2.7.1.49; EC 2.7.4.7 from Schizosaccharomyces pombe

34% id,
36% cov

THI20_YEAST / Q08224: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI20; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase; EC 2.7.1.49; EC 2.7.4.7; EC 3.5.99.2 from Saccharomyces cerevisiae
Q08224: hydroxymethylpyrimidine kinase (EC 2.7.1.49); phosphooxymethylpyrimidine kinase (EC 2.7.4.7); aminopyrimidine aminohydrolase (EC 3.5.99.2) from Saccharomyces cerevisiae

33% id,
37% cov

THI21_YEAST / Q08975: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase THI21; Hydroxymethylpyrimidine kinase; HMP kinase; Hydroxymethylpyrimidine phosphate kinase; HMP-P kinase; HMP-phosphate kinase; HMPP kinase; EC 2.7.1.49; EC 2.7.4.7 from Saccharomyces cerevisiae

29% id,
37% cov

More...

Dshi_1997: xylulokinase (RefSeq)
is similar to:
PaperBLAST

FGGY_HUMAN / Q96C11: FGGY carbohydrate kinase domain-containing protein; D-ribulokinase FGGY; EC 2.7.1.47 from Homo sapiens
FGGY / Q96C11: FGGY carbohydrate kinase domain-containing protein (EC 2.7.1.47) from Homo sapiens
Q96C11: D-ribulokinase (EC 2.7.1.47) from Homo sapiens

23% id,
49% cov

Dshi_2401: PEP-utilizing protein (RefSeq)
is similar to:
PaperBLAST

KPYK_GEOSE / Q02499: Pyruvate kinase; PK; ATP:pyruvate 2-O-phosphotransferase; EC 2.7.1.40 from Geobacillus stearothermophilus
Q02499: pyruvate kinase (EC 2.7.1.40) from Geobacillus stearothermophilus

26% id,
39% cov

P51181: pyruvate kinase (EC 2.7.1.40) from Bacillus licheniformis

29% id,
19% cov

P51182: pyruvate kinase (EC 2.7.1.40) from Sporosarcina psychrophila

28% id,
18% cov

Dshi_0911: Thiamine-phosphate diphosphorylase (RefSeq)
is similar to:
PaperBLAST

TPS1L_ARATH / Q5M731: Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic; EC 2.5.1.3; EC 2.7.1.49 from Arabidopsis thaliana
TH1 / Q5M731: 4-amino-2-methyl-5-phosphomethylpyrimidine kinase (EC 2.7.1.49; EC 2.5.1.3; EC 2.7.4.7) from Arabidopsis thaliana

28% id,
31% cov

TPS1_BRANA / O48881: Thiamine biosynthetic bifunctional enzyme BTH1, chloroplastic; EC 2.5.1.3; EC 2.7.1.49 from Brassica napus
O48881: hydroxymethylpyrimidine kinase (EC 2.7.1.49); phosphooxymethylpyrimidine kinase (EC 2.7.4.7) from Brassica napus

28% id,
31% cov

Dshi_2062: PTSINtr with GAF domain, PtsP (RefSeq)
is similar to:
PaperBLAST

P51181: pyruvate kinase (EC 2.7.1.40) from Bacillus licheniformis

29% id,
15% cov

KPYK_GEOSE / Q02499: Pyruvate kinase; PK; ATP:pyruvate 2-O-phosphotransferase; EC 2.7.1.40 from Geobacillus stearothermophilus
Q02499: pyruvate kinase (EC 2.7.1.40) from Geobacillus stearothermophilus

45% id,
9% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 20 reading frames. Except for 3 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

521925-523652 (frame +3) on 57145
is similar to:
PaperBLAST

FGGY_HUMAN / Q96C11: FGGY carbohydrate kinase domain-containing protein; D-ribulokinase FGGY; EC 2.7.1.47 from Homo sapiens
FGGY / Q96C11: FGGY carbohydrate kinase domain-containing protein (EC 2.7.1.47) from Homo sapiens
Q96C11: D-ribulokinase (EC 2.7.1.47) from Homo sapiens
Also see hits to annotated proteins above

30% id,
97% cov

YDR09_YEAST / Q04585: D-ribulokinase YDR109C; EC 2.7.1.47 from Saccharomyces cerevisiae
YDR109C / Q04585: D-ribulokinase (EC 2.7.1.47) from Saccharomyces cerevisiae
Q04585: D-ribulokinase (EC 2.7.1.47) from Saccharomyces cerevisiae
Also see hits to annotated proteins above

25% id,
51% cov

2115819-2117831 (frame -1) on 57145
is similar to:
PaperBLAST

FGGY_HUMAN / Q96C11: FGGY carbohydrate kinase domain-containing protein; D-ribulokinase FGGY; EC 2.7.1.47 from Homo sapiens
FGGY / Q96C11: FGGY carbohydrate kinase domain-containing protein (EC 2.7.1.47) from Homo sapiens
Q96C11: D-ribulokinase (EC 2.7.1.47) from Homo sapiens
Also see hits to annotated proteins above

23% id,
50% cov

3599338-3600918 (frame +1) on 57145
is similar to:
PaperBLAST

YDR09_YEAST / Q04585: D-ribulokinase YDR109C; EC 2.7.1.47 from Saccharomyces cerevisiae
YDR109C / Q04585: D-ribulokinase (EC 2.7.1.47) from Saccharomyces cerevisiae
Q04585: D-ribulokinase (EC 2.7.1.47) from Saccharomyces cerevisiae
Also see hits to annotated proteins above

26% id,
19% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory