Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_2797: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

Dshi_2797: Fructokinase (EC 2.7.1.4) from Dinoroseobacter shibae

100% id,
100% cov

frk / GB|AAB52373.1: fructokinase; EC 2.7.1.4 from Rhizobium leguminosarum

52% id,
86% cov

AO353_25910: Fructokinase (EC 2.7.1.4) from Pseudomonas fluorescens

37% id,
99% cov

More...

Dshi_1304: Enoyl-CoA hydratase/isomerase (RefSeq)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

33% id,
97% cov

Dshi_1753: Enoyl-CoA hydratase/isomerase (RefSeq)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

31% id,
99% cov

Dshi_1976: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

33% id,
89% cov

SCRK1_ORYSJ / Q0JGZ6: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

33% id,
89% cov

Sama_0561: Fructokinase (EC 2.7.1.4) from Shewanella amazonensis

28% id,
83% cov

Dshi_1268: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

29% id,
98% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

29% id,
97% cov

Q9M1B9: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

27% id,
99% cov

More...

Dshi_3022: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

SCRK_KLEPN / P26420: Fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / GB|CAA43322.1: fructokinase; EC 2.7.1.4 from Klebsiella pneumoniae
scrK / P26420: fructokinase (EC 2.7.1.4) from Klebsiella pneumoniae

30% id,
78% cov

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

27% id,
87% cov

SCRK1_ORYSI / A2WXV8: Fructokinase-1; Fructokinase I; OsFKI; EC 2.7.1.4 from Oryza sativa

25% id,
89% cov

More...

Dshi_1547: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

frk / GB|AAB52373.1: fructokinase; EC 2.7.1.4 from Rhizobium leguminosarum

25% id,
79% cov

G4T023: fructokinase (EC 2.7.1.4) from Methylotuvimicrobium alcaliphilum

41% id,
20% cov

Shewana3_0069: Fructokinase (EC 2.7.1.4) from Shewanella sp.

29% id,
25% cov

Dshi_1621: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

35% id,
36% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory