Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 10 curated entries in PaperBLAST's database that match '2.7.1.56' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1621: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

AO356_07330: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas fluorescens

34% id,
100% cov

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

35% id,
98% cov

K1PF_XANCP / P23354: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Xanthomonas campestris

32% id,
88% cov

More...

Dshi_1976: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii

31% id,
89% cov

K1PF_XANCP / P23354: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Xanthomonas campestris

31% id,
82% cov

K1PF_VIBCH / Q9KM71: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Vibrio cholerae

27% id,
88% cov

More...

Dshi_1547: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

AO356_07330: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas fluorescens

27% id,
83% cov

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

25% id,
80% cov

Dshi_1268: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

AO356_07330: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas fluorescens

26% id,
84% cov

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

31% id,
35% cov

K1PF_MYCGE / Q49396: Putative 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Mycoplasma genitalium

30% id,
24% cov

Dshi_2797: PfkB domain protein (RefSeq)
is similar to:
PaperBLAST

K1PF_HALVD / D4GYE6: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Haloferax volcanii

35% id,
37% cov

Psest_3354: 1-phosphofructokinase (EC 2.7.1.56) from Pseudomonas stutzeri

32% id,
39% cov

K1PF_ECOLI / P0AEW9: 1-phosphofructokinase; Fructose 1-phosphate kinase; Fru1PK; EC 2.7.1.56 from Escherichia coli
Fpk / b2168: 1-phosphofructokinase (EC 2.7.1.56) from Escherichia coli
fruK / P0AEW9: 1-phosphofructokinase (EC 2.7.1.56) from Escherichia coli

31% id,
31% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory