Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 99 curated entries in PaperBLAST's database that match '2.7.1.7'.
These curated entries have 67 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_1609: Shikimate kinase (RefSeq) is similar to: | PaperBLAST |
CCNA_03103: shikimate kinase (EC 2.7.1.71) from Caulobacter crescentus | 47% id, 83% cov |
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii | 38% id, 95% cov |
AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli | 34% id, 97% cov |
Dshi_1308: NADH-quinone oxidoreductase, B subunit (RefSeq) is similar to: | PaperBLAST |
Q57936: polynucleotide 5'-hydroxyl-kinase (EC 2.7.1.78) from Pyrococcus horikoshii | 37% id, 86% cov |
Dshi_2001: ROK family protein (RefSeq) is similar to: | PaperBLAST |
rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis | 30% id, 95% cov |
Dshi_1268: PfkB domain protein (RefSeq) is similar to: | PaperBLAST |
NK_METJA / Q57849: Nucleoside kinase; NK; ATP-dependent nucleoside monophosphokinase; Cytidine kinase; Guanosine-inosine kinase; EC 2.7.1.213; EC 2.7.1.73 from Methanocaldococcus jannaschii | 27% id, 45% cov |
Dshi_1777: ATP-dependent protease La (RefSeq) is similar to: | PaperBLAST |
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii | 52% id, 16% cov |
Dshi_1608: 3-dehydroquinate synthase (RefSeq) is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 33% id, 23% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 41% id, 12% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 30% id, 9% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
720325-721035 (frame -3) on 57145 is similar to: | PaperBLAST |
KITM_HUMAN / O00142: Thymidine kinase 2, mitochondrial; 2'-deoxyuridine kinase TK2; Deoxycytidine kinase TK2; Mt-TK; EC 2.7.1.21; EC 2.7.1.74; EC 2.7.1.- from Homo sapiens | 67% id, 9% cov |
Lawrence Berkeley National Laboratory