Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 31 curated entries in PaperBLAST's database that match '2.7.2.1' as complete word(s).

These curated entries have 23 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_5006: hypothetical protein (NCBI) is similar to:	PaperBLAST
ACKA_CORGL / P77845: Acetate kinase; Acetokinase; EC 2.7.2.1 from Corynebacterium glutamicum	39% id, 99% cov
G4T0C7: acetate kinase (EC 2.7.2.1) from Methylotuvimicrobium alcaliphilum	40% id, 97% cov
ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis	39% id, 99% cov
YhaA / b3115: propionate kinase (EC 2.7.2.7; EC 2.7.2.1; EC 2.7.2.15; EC 2.7.2.14) from Escherichia coli	38% id, 96% cov
P9WQH1: acetate kinase (EC 2.7.2.1) from Mycobacterium tuberculosis	37% id, 99% cov
P0CW04: acetate kinase (EC 2.7.2.1) from Methanosarcina mazei	38% id, 96% cov
P0CW05: acetate kinase (EC 2.7.2.1) from Methanosarcina mazei	38% id, 96% cov
E3W769: acetate kinase (EC 2.7.2.1) from Shewanella sp.	37% id, 100% cov
ACKA_METTE / P38502: Acetate kinase; Acetokinase; EC 2.7.2.1 from Methanosarcina thermophila P38502: acetate kinase (EC 2.7.2.1) from Methanosarcina thermophila	37% id, 97% cov
Q9F1X7: acetate kinase (EC 2.7.2.1) from Fructilactobacillus sanfranciscensis	36% id, 98% cov
ACKA_THEMA / Q9WYB1: Acetate kinase; Acetokinase; EC 2.7.2.1 from Thermotoga maritima ackA / PDB\|2IIR_A: acetate kinase; EC 2.7.2.1 from Thermotoga maritima Q9WYB1: acetate kinase (EC 2.7.2.1) from Thermotoga maritima	36% id, 98% cov
A2RNG5: acetate kinase (EC 2.7.2.1) from Lactococcus lactis	36% id, 98% cov
ACKA_SALTY / P63411: Acetate kinase AckA; Acetokinase; EC 2.7.2.1 from Salmonella typhimurium P63411: acetate kinase (EC 2.7.2.1) from Salmonella enterica	35% id, 99% cov
ACKA_ECOLI / P0A6A3: Acetate kinase; Acetokinase; EC 2.7.2.1 from Escherichia coli AckA / b2296: acetate kinase (EC 2.7.2.15; EC 2.7.2.1; EC 2.7.2.7; EC 2.7.2.14) from Escherichia coli ackA / RF\|NP_416799: acetate kinase; EC 2.7.2.1 from Escherichia coli P0A6A5: acetate kinase (EC 2.7.2.1) from Escherichia coli P0A6A3: acetate kinase (EC 2.7.2.1) from Escherichia coli	35% id, 99% cov
A2RNG4: acetate kinase (EC 2.7.2.1) from Lactococcus lactis	35% id, 98% cov
B2RK02: acetate kinase (EC 2.7.2.1) from Porphyromonas gingivalis	34% id, 99% cov
P75245: acetate kinase (EC 2.7.2.1) from Mycoplasma pneumoniae	34% id, 98% cov
J9W3A6: acetate kinase (EC 2.7.2.1) from Cryptococcus neoformans	32% id, 100% cov
More...

Dshi_0632: acetate kinase (RefSeq) is similar to:	PaperBLAST
Q9F1X7: acetate kinase (EC 2.7.2.1) from Fructilactobacillus sanfranciscensis	39% id, 99% cov
B2RK02: acetate kinase (EC 2.7.2.1) from Porphyromonas gingivalis	38% id, 97% cov
ACKA_ECOLI / P0A6A3: Acetate kinase; Acetokinase; EC 2.7.2.1 from Escherichia coli AckA / b2296: acetate kinase (EC 2.7.2.15; EC 2.7.2.1; EC 2.7.2.7; EC 2.7.2.14) from Escherichia coli ackA / RF\|NP_416799: acetate kinase; EC 2.7.2.1 from Escherichia coli P0A6A5: acetate kinase (EC 2.7.2.1) from Escherichia coli P0A6A3: acetate kinase (EC 2.7.2.1) from Escherichia coli	38% id, 98% cov
ACKA_SALTY / P63411: Acetate kinase AckA; Acetokinase; EC 2.7.2.1 from Salmonella typhimurium P63411: acetate kinase (EC 2.7.2.1) from Salmonella enterica	38% id, 98% cov
YhaA / b3115: propionate kinase (EC 2.7.2.7; EC 2.7.2.1; EC 2.7.2.15; EC 2.7.2.14) from Escherichia coli	39% id, 95% cov
P9WQH1: acetate kinase (EC 2.7.2.1) from Mycobacterium tuberculosis	39% id, 97% cov
ACKA_THEMA / Q9WYB1: Acetate kinase; Acetokinase; EC 2.7.2.1 from Thermotoga maritima ackA / PDB\|2IIR_A: acetate kinase; EC 2.7.2.1 from Thermotoga maritima Q9WYB1: acetate kinase (EC 2.7.2.1) from Thermotoga maritima	38% id, 97% cov
ACKA_BACSU / P37877: Acetate kinase; Acetokinase; EC 2.7.2.1 from Bacillus subtilis	37% id, 99% cov
G4T0C7: acetate kinase (EC 2.7.2.1) from Methylotuvimicrobium alcaliphilum	38% id, 97% cov
E3W769: acetate kinase (EC 2.7.2.1) from Shewanella sp.	38% id, 97% cov
ACKA_METTE / P38502: Acetate kinase; Acetokinase; EC 2.7.2.1 from Methanosarcina thermophila P38502: acetate kinase (EC 2.7.2.1) from Methanosarcina thermophila	38% id, 95% cov
A2RNG4: acetate kinase (EC 2.7.2.1) from Lactococcus lactis	37% id, 100% cov
P0CW04: acetate kinase (EC 2.7.2.1) from Methanosarcina mazei	38% id, 95% cov
P0CW05: acetate kinase (EC 2.7.2.1) from Methanosarcina mazei	38% id, 95% cov
ACKA_CORGL / P77845: Acetate kinase; Acetokinase; EC 2.7.2.1 from Corynebacterium glutamicum	36% id, 100% cov
A2RNG5: acetate kinase (EC 2.7.2.1) from Lactococcus lactis	36% id, 99% cov
P75245: acetate kinase (EC 2.7.2.1) from Mycoplasma pneumoniae	35% id, 97% cov
C4M1C3: acetate kinase (EC 2.7.2.1); acetate kinase (diphosphate) (EC 2.7.2.12) from Entamoeba histolytica	30% id, 98% cov
J9W3A6: acetate kinase (EC 2.7.2.1) from Cryptococcus neoformans	30% id, 97% cov
More...

Dshi_0680: phosphoribosylaminoimidazole carboxylase, ATPase subunit (RefSeq) is similar to:	PaperBLAST
PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli	30% id, 92% cov

Dshi_1395: acetyl-CoA carboxylase, biotin carboxylase (RefSeq) is similar to:	PaperBLAST
PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli	24% id, 97% cov

Dshi_1301: Carbamoyl-phosphate synthase L chain ATP-binding (RefSeq) is similar to:	PaperBLAST
PurT / b1849: phosphoribosylglycinamide formyltransferase 2 (EC 2.7.2.15; EC 2.7.2.1) from Escherichia coli	27% id, 76% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory