Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 51 curated entries in PaperBLAST's database that match '2.7.7.9' as complete word(s).

These curated entries have 41 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_3861: UDP-glucose 6-dehydrogenase (RefSeq)
is similar to:		 PaperBLAST

Q8GQP9: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus equi

 54% id,
100% cov

Dshi_3577: UTP-glucose-1-phosphate uridylyltransferase (RefSeq)
is similar to:		 PaperBLAST

A0A0W1QGK2: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Sphingomonas sp.

 55% id,
99% cov

Q8PK83: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Xanthomonas citri

 51% id,
97% cov

A0A0H2X8N4: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Xanthomonas campestris

 52% id,
92% cov

More...

Dshi_4118: glucose-1-phosphate thymidylyltransferase (RefSeq)
is similar to:		 PaperBLAST

Q8GQP8: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Streptococcus equi

 29% id,
89% cov

Q8PK83: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Xanthomonas citri

 27% id,
94% cov

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

 30% id,
84% cov

More...

Dshi_1294: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase (RefSeq)
is similar to:		 PaperBLAST

S1PNA_SULTO / Q975F9: Bifunctional sugar-1-phosphate nucleotidylyltransferase/acetyltransferase; EC 2.7.7.24; EC 2.7.7.9; EC 2.7.7.83; EC 2.7.7.23; EC 2.3.1.276; EC 2.3.1.157 from Sulfurisphaera tokodaii
Q975F9: glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157); galactosamine-1-phosphate N-acetyltransferase (EC 2.3.1.276); UDP-N-acetylglucosamine diphosphorylase (EC 2.7.7.23); glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24); aldose-1-phosphate nucleotidyltransferase (EC 2.7.7.37); UDP-N-acetylgalactosamine diphosphorylase (EC 2.7.7.83); UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Sulfurisphaera tokodaii

 34% id,
38% cov

Dshi_3436: Nucleotidyl transferase (RefSeq)
is similar to:		 PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

 36% id,
30% cov

CUGP_SYNY3 / P74285: UTP--glucose-1-phosphate uridylyltransferase; Cyanobacterial UDP-glucose pyrophosphorylase; UDP-glucose pyrophosphorylase; UDP-Glc PPase; EC 2.7.7.9 from Synechocystis sp.
P74285: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Synechocystis sp.

 33% id,
25% cov

O05576: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Mycobacterium tuberculosis

 36% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory