Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 17 curated entries in PaperBLAST's database that match '3.1.1.25' as complete word(s).
These curated entries have 17 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_1240: SMP-30/Gluconolaconase/LRE domain protein (RefSeq) is similar to: | PaperBLAST |
SMc00883: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Sinorhizobium meliloti | 36% id, 93% cov |
Ac3H11_615: L-arabinolactonase/D-galactonolactonase (EC 3.1.1.15; EC 3.1.1.25) from Acidovorax sp. | 35% id, 88% cov |
AO356_20235: L-arabinolactonase (EC 3.1.1.15) / D-galactonolactonase (EC 3.1.1.25) from Pseudomonas fluorescens | 32% id, 92% cov |
Dshi_0338: beta-lactamase domain protein (RefSeq) is similar to: | PaperBLAST |
P0CJ63: 1,4-lactonase (EC 3.1.1.25); quorum-quenching N-acyl-homoserine lactonase (EC 3.1.1.81) from Bacillus thuringiensis | 27% id, 92% cov |
Dshi_3391: beta-lactamase domain protein (RefSeq) is similar to: | PaperBLAST |
P0CJ63: 1,4-lactonase (EC 3.1.1.25); quorum-quenching N-acyl-homoserine lactonase (EC 3.1.1.81) from Bacillus thuringiensis | 29% id, 82% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory