Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 19 curated entries in PaperBLAST's database that match '3.1.2.4'.
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1751: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens | 57% id, 100% cov |
C3KM96: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Sinorhizobium fredii | 42% id, 94% cov |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 37% id, 92% cov |
| Dshi_3370: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 52% id, 100% cov |
C3KM96: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Sinorhizobium fredii | 29% id, 72% cov |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 27% id, 51% cov |
| Dshi_3723: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 30% id, 100% cov |
HIBCH_NEUCR / Q1K7A4: Small ribosomal subunit protein mS47; 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Neurospora crassa | 26% id, 45% cov |
| Dshi_1304: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 31% id, 94% cov |
HIBC1_ARATH / Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase 1; CoA-thioester hydrolase CHY1; EC 3.1.2.-; EC 3.1.2.4 from Arabidopsis thaliana | 29% id, 51% cov |
| Dshi_1604: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 29% id, 95% cov |
HIBCH_RAT / Q5XIE6: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Rattus norvegicus | 29% id, 59% cov |
HIBC1_ARATH / Q9LKJ1: 3-hydroxyisobutyryl-CoA hydrolase 1; CoA-thioester hydrolase CHY1; EC 3.1.2.-; EC 3.1.2.4 from Arabidopsis thaliana | 24% id, 68% cov |
| Dshi_3826: 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 31% id, 76% cov |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 29% id, 72% cov |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 29% id, 67% cov |
| Dshi_0835: 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 31% id, 72% cov |
| Dshi_1048: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 33% id, 65% cov |
Pf1N1B4_4790: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 25% id, 78% cov |
PS417_13835: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas simiae | 31% id, 62% cov |
| Dshi_1753: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 33% id, 58% cov |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 25% id, 75% cov |
PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens | 29% id, 66% cov |
| Dshi_3329: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 27% id, 65% cov |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 28% id, 57% cov |
PGA1_c17350: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Phaeobacter inhibens | 27% id, 59% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1819179-1819982 (frame -1) on 57145 is similar to: | PaperBLAST |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 32% id, 63% cov |
HIBCH_YEAST / P28817: Small ribosomal subunit protein mS47; 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Saccharomyces cerevisiae | 27% id, 45% cov |
EHD3 / Q5AI24: 3-hydroxypropanonyl-CoA hydrolase (EC 3.1.2.4) from Candida albicans | 27% id, 34% cov |
| 3492300-3494198 (frame +3) on 57145 is similar to: | PaperBLAST |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 28% id, 64% cov |
HIBCH_RAT / Q5XIE6: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Rattus norvegicus | 28% id, 57% cov |
Lawrence Berkeley National Laboratory