Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 17 curated entries in PaperBLAST's database that match '3.2.1.108' as complete word(s).

These curated entries have 12 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1654: Beta-glucosidase (RefSeq)
is similar to:
PaperBLAST

AAQ79765.1: lactase phlorizin hydrolase (LCT;LPH) (EC 3.2.1.108|3.2.1.62)

32% id,
98% cov

LPH_SHEEP / W5PLZ6: Lactase/phlorizin hydrolase; Lactase/glycosylceramidase; EC 3.2.1.108; EC 3.2.1.62 from Ovis aries

35% id,
24% cov

CAA30801.1: lactase-phlorizin hydrolase (Lct) (EC 3.2.1.108|3.2.1.62)

34% id,
24% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory