Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 529 curated entries in PaperBLAST's database that match '3.2.1.21' as complete word(s).

These curated entries have 444 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_1654: Beta-glucosidase (RefSeq)
is similar to:
PaperBLAST

PGA1_c07840: Beta-glucosidase (EC 3.2.1.21) from Phaeobacter inhibens

70% id,
98% cov

Q9RA61: beta-glucosidase (EC 3.2.1.21) from Thermus thermophilus

47% id,
97% cov

Q8GEB4: beta-glucosidase (EC 3.2.1.21) from Thermus thermophilus

46% id,
98% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2470827-2471651 (frame +3) on 57145
is similar to:
PaperBLAST

psu1 / RF|NP_593500.1: cell wall protein Psu1, beta-glucosidase (predicted); EC 3.2.1.21 from Schizosaccharomyces pombe

33% id,
26% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory