Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 241 curated entries in PaperBLAST's database that match '3.2.1.26' as complete word(s).
These curated entries have 195 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1824: alpha amylase catalytic region (RefSeq) is similar to: | PaperBLAST |
ams / G4T024: sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum | 30% id, 43% cov |
| Dshi_3898: alpha amylase catalytic region (RefSeq) is similar to: | PaperBLAST |
ams / G4T024: sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum | 28% id, 30% cov |
| Dshi_1649: alpha amylase catalytic region (RefSeq) is similar to: | PaperBLAST |
ams / G4T024: sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum | 25% id, 31% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 121830-123470 (frame -2) on 57147 is similar to: | PaperBLAST |
ams / G4T024: sucrose β-fructofuranosidase (EC 3.2.1.26; EC 2.4.1.4) from Methylotuvimicrobium alcaliphilum | 28% id, 34% cov |
Lawrence Berkeley National Laboratory