Curated BLAST for Genomes


Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 14 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_0386: N-formylglutamate amidohydrolase (RefSeq)
is similar to:

Ac3H11_2548: N-formylglutamate deformylase (EC from Acidovorax sp.

31% id,
94% cov

PGA1_c36330: N-formylglutamate deformylase (EC from Phaeobacter inhibens

29% id,
91% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory