Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 16 curated entries in PaperBLAST's database that match '3.5.2.7'.

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_3094: dihydroorotase, multifunctional complex type (RefSeq)
is similar to:
PaperBLAST

Ga0059261_3964: Imidazolonepropionase (EC 3.5.2.7) from Sphingomonas koreensis

23% id,
95% cov

Dshi_2773: amidohydrolase (RefSeq)
is similar to:
PaperBLAST

PGA1_c36350: Imidazolonepropionase (EC 3.5.2.7) from Phaeobacter inhibens

39% id,
20% cov

Dshi_2365: urease, alpha subunit (RefSeq)
is similar to:
PaperBLAST

SO0095: Imidazolonepropionase (EC 3.5.2.7) from Shewanella oneidensis

41% id,
14% cov

Dshi_1370: dihydropyrimidinase (RefSeq)
is similar to:
PaperBLAST

HUTI_BACSU / P42084: Imidazolonepropionase; Imidazolone-5-propionate hydrolase; EC 3.5.2.7 from Bacillus subtilis
P42084: imidazolonepropionase (EC 3.5.2.7) from Bacillus subtilis

40% id,
11% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory