Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 65 curated entries in PaperBLAST's database that match '3.5.3.1' as complete word(s).

These curated entries have 50 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_2309: arginase (RefSeq) is similar to:	PaperBLAST
arcA / P14012: arginase subunit (EC 3.5.3.1) from Agrobacterium fabrum	59% id, 94% cov
N515DRAFT_0348: Arginase (EC 3.5.3.1) from Dyella japonica	46% id, 100% cov
Ac3H11_701: Arginase (EC 3.5.3.1) from Acidovorax sp.	50% id, 83% cov
ARGI_BACCD / P53608: Arginase; EC 3.5.3.1 from Bacillus caldovelox P53608: arginase (EC 3.5.3.1) from [Bacillus] caldovelox	40% id, 98% cov
A4IJM8: arginase (EC 3.5.3.1) from Geobacillus thermodenitrificans	41% id, 98% cov
ARGI_BACSU / P39138: Arginase; EC 3.5.3.1 from Bacillus subtilis argI / P39138: arginase (EC 3.5.3.1) from Bacillus subtilis P39138: arginase (EC 3.5.3.1) from Bacillus subtilis	40% id, 98% cov
A0A0D5ZYA4: arginase (EC 3.5.3.1) from Heteropneustes fossilis	38% id, 87% cov
Q4A3J0: arginase (EC 3.5.3.1) from Cyprinus carpio	38% id, 87% cov
A0A1S3R1W2: arginase (EC 3.5.3.1) from Salmo salar	38% id, 87% cov
C0H9C1: arginase (EC 3.5.3.1) from Salmo salar	38% id, 87% cov
U6BQJ3: arginase (EC 3.5.3.1) from Heteropneustes fossilis	37% id, 87% cov
A0A1P8DAN3: arginase (EC 3.5.3.1) from Oncorhynchus mykiss	37% id, 87% cov
Q4A4U9: arginase (EC 3.5.3.1) from Cyprinus carpio	37% id, 87% cov
A0A060YSI8: arginase (EC 3.5.3.1) from Oncorhynchus mykiss	37% id, 87% cov
ARGI2_HUMAN / P78540: Arginase-2, mitochondrial; Arginase II; Kidney-type arginase; Non-hepatic arginase; Type II arginase; EC 3.5.3.1 from Homo sapiens ARG2 / P78540: Arginase-2, mitochondrial (EC 3.5.3.1) from Homo sapiens P78540: arginase (EC 3.5.3.1) from Homo sapiens	37% id, 89% cov
ARGI1_XENLA / P30759: Arginase-1; Arginase, hepatic; Type I arginase; EC 3.5.3.1 from Xenopus laevis	34% id, 94% cov
ARGI1_HUMAN / P05089: Arginase-1; Liver-type arginase; Type I arginase; EC 3.5.3.1 from Homo sapiens ARG1 / P05089: Arginase-1 (EC 3.5.3.1) from Homo sapiens P05089: arginase (EC 3.5.3.1) from Homo sapiens	35% id, 92% cov
Q4A3J1: arginase (EC 3.5.3.1) from Cyprinus carpio	37% id, 87% cov
ARGI2_MOUSE / O08691: Arginase-2, mitochondrial; Arginase II; Kidney-type arginase; Non-hepatic arginase; Type II arginase; EC 3.5.3.1 from Mus musculus	36% id, 89% cov
Q4A3J2: arginase (EC 3.5.3.1) from Cyprinus carpio	36% id, 88% cov
ARGI1_RAT / P07824: Arginase-1; Liver-type arginase; Type I arginase; EC 3.5.3.1 from Rattus norvegicus P07824: arginase (EC 3.5.3.1) from Rattus norvegicus	35% id, 92% cov
ARGI1_MOUSE / Q61176: Arginase-1; Liver-type arginase; Type I arginase; EC 3.5.3.1 from Mus musculus Q61176: arginase (EC 3.5.3.1) from Mus musculus	33% id, 92% cov
Q4VK78: arginase (EC 3.5.3.1) from Oryctolagus cuniculus	36% id, 84% cov
A0A1P8DAM2: arginase (EC 3.5.3.1) from Oncorhynchus mykiss	35% id, 88% cov
B5XDG2: arginase (EC 3.5.3.1) from Salmo salar	35% id, 88% cov
O08701: arginase (EC 3.5.3.1) from Rattus norvegicus	36% id, 84% cov
O96394: arginase (EC 3.5.3.1) from Leishmania amazonensis	35% id, 86% cov
Q6TUJ5: arginase (EC 3.5.3.1) from Leishmania mexicana	35% id, 86% cov
car1 / RF\|NP_595133.1: arginase Car1; EC 3.5.3.1 from Schizosaccharomyces pombe	34% id, 89% cov
ARGI_YEAST / P00812: Arginase; EC 3.5.3.1 from Saccharomyces cerevisiae CAR1 / P00812: arginase subunit (EC 3.5.3.1) from Saccharomyces cerevisiae	34% id, 89% cov
ARGI_KLULA / Q6CLS8: Arginase; EC 3.5.3.1 from Kluyveromyces lactis	34% id, 89% cov
I7KJN7: arginase (EC 3.5.3.1) from Oncorhynchus mykiss	34% id, 88% cov
A0A1S3NED8: arginase (EC 3.5.3.1) from Salmo salar	34% id, 88% cov
car3 / RF\|NP_593549.1: arginase Aru1; EC 3.5.3.1 from Schizosaccharomyces pombe	33% id, 89% cov
A0A145YEM9: arginase (EC 3.5.3.1) from Leishmania infantum	35% id, 86% cov
agaA: arginase; EC 3.5.3.1 from Emericella nidulans	32% id, 93% cov
ARGI_ENTH1 / C4LSS0: Arginase; EhArg; EC 3.5.3.1 from Entamoeba histolytica C4LSS0: arginase (EC 3.5.3.1) from Entamoeba histolytica	28% id, 99% cov
ARGI_NEUCR / P33280: Arginase; EC 3.5.3.1 from Neurospora crassa	34% id, 78% cov
Q6WVP6: arginase (EC 3.5.3.1) from Schistosoma mansoni	31% id, 85% cov
ARGI_PLABA / A0A509AF89: Arginase; EC 3.5.3.1 from Plasmodium berghei	27% id, 90% cov
ARGI_MEDTR / G7JFU5: Arginase, mitochondrial; Agmatinase ARGAH; Arginine amidohydrolase; MtARGAH; EC 3.5.3.1; EC 3.5.3.11 from Medicago truncatula	28% id, 77% cov
ARGI_PLAF7 / Q8I384: Arginase; PFA; PfArg; EC 3.5.3.1 from Plasmodium falciparum Q8I384: arginase (EC 3.5.3.1) from Plasmodium falciparum	34% id, 47% cov
O25949: arginase (EC 3.5.3.1) from Helicobacter pylori	23% id, 63% cov
More...

Dshi_1735: putative agmatinase (RefSeq) is similar to:	PaperBLAST
GDAH_HUMAN / Q9BSE5: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Homo sapiens	40% id, 86% cov
GDAH_MOUSE / A2AS89: Guanidino acid hydrolase, mitochondrial; Arginase, mitochondrial; Guanidinobutyrase, mitochondrial; Guanidinopropionase, mitochondrial; EC 3.5.3.-; EC 3.5.3.1; EC 3.5.3.7; EC 3.5.3.17 from Mus musculus	37% id, 88% cov
ARGI_MEDTR / G7JFU5: Arginase, mitochondrial; Agmatinase ARGAH; Arginine amidohydrolase; MtARGAH; EC 3.5.3.1; EC 3.5.3.11 from Medicago truncatula	30% id, 88% cov
ARGI1_HUMAN / P05089: Arginase-1; Liver-type arginase; Type I arginase; EC 3.5.3.1 from Homo sapiens ARG1 / P05089: Arginase-1 (EC 3.5.3.1) from Homo sapiens P05089: arginase (EC 3.5.3.1) from Homo sapiens	27% id, 92% cov
ARGI1_MOUSE / Q61176: Arginase-1; Liver-type arginase; Type I arginase; EC 3.5.3.1 from Mus musculus Q61176: arginase (EC 3.5.3.1) from Mus musculus	26% id, 95% cov
ARGI1_ORYSI / B8AU84: Arginase 1, mitochondrial; Arginine amidohydrolase 1; EC 3.5.3.1 from Oryza sativa	29% id, 84% cov
ARG1 / Q5UNS2: arginase (EC 3.5.3.1) from Solanum lycopersicum Q5UNS2: arginase (EC 3.5.3.1) from Solanum lycopersicum	29% id, 85% cov
ARG2 / Q5UNS1: arginase (EC 3.5.3.1) from Solanum lycopersicum Q5UNS1: arginase (EC 3.5.3.1) from Solanum lycopersicum	29% id, 85% cov
A0A1P8DAN3: arginase (EC 3.5.3.1) from Oncorhynchus mykiss	26% id, 93% cov
ARGI1_ARATH / P46637: Arginase 1, mitochondrial; Agmatinase ARGAH1; Arginine amidohydrolase 1; AtARGAH1; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana arginase / P46637: arginase (EC 3.5.3.1) from Arabidopsis thaliana	29% id, 84% cov
U6BQJ3: arginase (EC 3.5.3.1) from Heteropneustes fossilis	28% id, 85% cov
ARGI2_HUMAN / P78540: Arginase-2, mitochondrial; Arginase II; Kidney-type arginase; Non-hepatic arginase; Type II arginase; EC 3.5.3.1 from Homo sapiens ARG2 / P78540: Arginase-2, mitochondrial (EC 3.5.3.1) from Homo sapiens P78540: arginase (EC 3.5.3.1) from Homo sapiens	28% id, 87% cov
C0H9C1: arginase (EC 3.5.3.1) from Salmo salar	25% id, 93% cov
O08701: arginase (EC 3.5.3.1) from Rattus norvegicus	25% id, 93% cov
Q4A3J0: arginase (EC 3.5.3.1) from Cyprinus carpio	26% id, 88% cov
Q4A3J1: arginase (EC 3.5.3.1) from Cyprinus carpio	28% id, 81% cov
Q4A4U9: arginase (EC 3.5.3.1) from Cyprinus carpio	28% id, 81% cov
ARGI2_ARATH / Q9ZPF5: Arginase 2, chloroplastic/mitochondrial; Agmatinase ARGAH2; Arginine amidohydrolase 2; EC 3.5.3.1; EC 3.5.3.11 from Arabidopsis thaliana	29% id, 79% cov
ARGI2_MOUSE / O08691: Arginase-2, mitochondrial; Arginase II; Kidney-type arginase; Non-hepatic arginase; Type II arginase; EC 3.5.3.1 from Mus musculus	25% id, 87% cov
agaA: arginase; EC 3.5.3.1 from Emericella nidulans	26% id, 82% cov
ARGI_NEUCR / P33280: Arginase; EC 3.5.3.1 from Neurospora crassa	25% id, 80% cov
ARGI_YEAST / P00812: Arginase; EC 3.5.3.1 from Saccharomyces cerevisiae CAR1 / P00812: arginase subunit (EC 3.5.3.1) from Saccharomyces cerevisiae	27% id, 64% cov
ARGI1_RAT / P07824: Arginase-1; Liver-type arginase; Type I arginase; EC 3.5.3.1 from Rattus norvegicus P07824: arginase (EC 3.5.3.1) from Rattus norvegicus	27% id, 56% cov
Q4A3J2: arginase (EC 3.5.3.1) from Cyprinus carpio	28% id, 45% cov
A0A0D5ZYA4: arginase (EC 3.5.3.1) from Heteropneustes fossilis	28% id, 45% cov
A0A1S3NED8: arginase (EC 3.5.3.1) from Salmo salar	26% id, 45% cov
I7KJN7: arginase (EC 3.5.3.1) from Oncorhynchus mykiss	26% id, 45% cov
A0A060YSI8: arginase (EC 3.5.3.1) from Oncorhynchus mykiss	29% id, 39% cov
A0A1S3R1W2: arginase (EC 3.5.3.1) from Salmo salar	28% id, 39% cov
ARGI_KLULA / Q6CLS8: Arginase; EC 3.5.3.1 from Kluyveromyces lactis	30% id, 35% cov
O96394: arginase (EC 3.5.3.1) from Leishmania amazonensis	29% id, 34% cov
Q6TUJ5: arginase (EC 3.5.3.1) from Leishmania mexicana	29% id, 34% cov
A0A145YEM9: arginase (EC 3.5.3.1) from Leishmania infantum	28% id, 34% cov
A0A1P8DAM2: arginase (EC 3.5.3.1) from Oncorhynchus mykiss	30% id, 31% cov
B5XDG2: arginase (EC 3.5.3.1) from Salmo salar	30% id, 31% cov
O96394: arginase (EC 3.5.3.1) from Leishmania amazonensis	36% id, 14% cov
Q6TUJ5: arginase (EC 3.5.3.1) from Leishmania mexicana	36% id, 14% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2437509-2438471 (frame +3) on 57145 is similar to:	PaperBLAST
arcA / P14012: arginase subunit (EC 3.5.3.1) from Agrobacterium fabrum Also see hits to annotated proteins above	57% id, 98% cov
Q4A3J0: arginase (EC 3.5.3.1) from Cyprinus carpio Also see hits to annotated proteins above	38% id, 90% cov
Q4A4U9: arginase (EC 3.5.3.1) from Cyprinus carpio Also see hits to annotated proteins above	37% id, 90% cov
Q4A3J1: arginase (EC 3.5.3.1) from Cyprinus carpio Also see hits to annotated proteins above	37% id, 90% cov
U6BQJ3: arginase (EC 3.5.3.1) from Heteropneustes fossilis Also see hits to annotated proteins above	37% id, 90% cov
I7KJN7: arginase (EC 3.5.3.1) from Oncorhynchus mykiss Also see hits to annotated proteins above	33% id, 94% cov
ARGI_KLULA / Q6CLS8: Arginase; EC 3.5.3.1 from Kluyveromyces lactis Also see hits to annotated proteins above	33% id, 91% cov
ARGI_PLABA / A0A509AF89: Arginase; EC 3.5.3.1 from Plasmodium berghei Also see hits to annotated proteins above	26% id, 94% cov
More...

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory