Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 19 curated entries in PaperBLAST's database that match '3.5.3.12' as complete word(s).

These curated entries have 15 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_3506: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq)
is similar to:
PaperBLAST

Q89413: agmatine deiminase (EC 3.5.3.12) from Chlorella virus

23% id,
81% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory