Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 12 curated entries in PaperBLAST's database that match '3.5.4.19' as complete word(s).
These curated entries have 8 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1515: Phosphoribosyl-AMP cyclohydrolase (RefSeq) is similar to: | PaperBLAST |
HIS3_METTH / O26347: Phosphoribosyl-AMP cyclohydrolase; PRA-CH; EC 3.5.4.19 from Methanothermobacter thermautotrophicus | 54% id, 83% cov |
Q8YH95: phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) from Brucella melitensis | 54% id, 78% cov |
HSERO_RS20310: phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) from Herbaspirillum seropedicae | 52% id, 64% cov |
| Dshi_0979: Histidinol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae | 38% id, 55% cov |
| Dshi_2575: phosphoribosyl-ATP pyrophosphohydrolase (RefSeq) is similar to: | PaperBLAST |
HisE / b2026: putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) from Escherichia coli | 47% id, 43% cov |
HIS2_ARATH / O82768: Histidine biosynthesis bifunctional protein hisIE, chloroplastic; Protein HISTIDINE BIOSYNTHESIS 2; EC 3.5.4.19; EC 3.6.1.31 from Arabidopsis thaliana | 38% id, 38% cov |
| Dshi_2034: Histidinol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae | 35% id, 53% cov |
| Dshi_2242: Histidinol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae | 33% id, 51% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1577595-1578014 (frame -1) on 57145 is similar to: | PaperBLAST |
Q8YH95: phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) from Brucella melitensis | 50% id, 91% cov |
Lawrence Berkeley National Laboratory