Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 23 curated entries in PaperBLAST's database that match '3.6.1.31' as complete word(s).

These curated entries have 18 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_2575: phosphoribosyl-ATP pyrophosphohydrolase (RefSeq)
is similar to:
PaperBLAST

Ga0059261_1051: phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Sphingomonas koreensis

59% id,
94% cov

CCNA_03854: phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Caulobacter crescentus

56% id,
93% cov

AZOBR_RS01690: phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) from Azospirillum brasilense

56% id,
89% cov

More...

Dshi_1160: MazG family protein (RefSeq)
is similar to:
PaperBLAST

Q72CU7: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31) from Desulfovibrio vulgaris
DVU1186: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31) from Desulfovibrio vulgaris

39% id,
96% cov

Dshi_1515: Phosphoribosyl-AMP cyclohydrolase (RefSeq)
is similar to:
PaperBLAST

HisE / b2026: putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) from Escherichia coli
hisI / P06989: putative bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase (EC 3.5.4.19; EC 3.6.1.31) from Escherichia coli

49% id,
44% cov

HIS2_ARATH / O82768: Histidine biosynthesis bifunctional protein hisIE, chloroplastic; Protein HISTIDINE BIOSYNTHESIS 2; EC 3.5.4.19; EC 3.6.1.31 from Arabidopsis thaliana
At-IE / O82768: phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19; EC 3.6.1.31) from Arabidopsis thaliana

42% id,
36% cov

HIS2_SCHPO / O59667: Histidine biosynthesis bifunctional protein his7; EC 3.5.4.19; EC 3.6.1.31 from Schizosaccharomyces pombe
his7 / GI|3006138: phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase His7; EC 3.5.4.19; EC 3.6.1.31 from Schizosaccharomyces pombe

40% id,
22% cov

More...

Dshi_0979: Histidinol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae

38% id,
55% cov

Dshi_2034: Histidinol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae

35% id,
53% cov

Dshi_2242: Histidinol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

HIS2_YEAST / P00815: Histidine biosynthesis trifunctional protein; EC 3.5.4.19; EC 3.6.1.31; EC 1.1.1.23 from Saccharomyces cerevisiae

33% id,
51% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory