Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 4 curated entries in PaperBLAST's database that match '3.7.1.9' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_5003: hypothetical protein (NCBI) is similar to: | PaperBLAST |
G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp. | 29% id, 90% cov |
P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens | 30% id, 57% cov |
| Dshi_2929: alpha/beta hydrolase fold (RefSeq) is similar to: | PaperBLAST |
G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp. | 27% id, 93% cov |
XYLF_PSEPU / P23106: 2-hydroxymuconate semialdehyde hydrolase; HMSH; 2-hydroxymuconic semialdehyde hydrolase; EC 3.7.1.9 from Pseudomonas putida | 32% id, 41% cov |
| Dshi_3504: alpha/beta hydrolase fold (RefSeq) is similar to: | PaperBLAST |
P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens | 23% id, 85% cov |
| Dshi_2992: alpha/beta hydrolase fold (RefSeq) is similar to: | PaperBLAST |
P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens | 35% id, 47% cov |
G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp. | 34% id, 41% cov |
| Dshi_1594: alpha/beta hydrolase fold (RefSeq) is similar to: | PaperBLAST |
G3KFX4: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas sp. | 31% id, 49% cov |
P96965: 2-hydroxymuconate-6-semialdehyde hydrolase (EC 3.7.1.9) from Pseudomonas fluorescens | 30% id, 44% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory