Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 15 curated entries in PaperBLAST's database that match '4.1.1.43'.
These curated entries have 9 distinct sequences.
Running ublast with E ≤ 0.01
Found 10 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_0535: Transketolase central region (RefSeq) is similar to: | PaperBLAST |
ppdcβ / G1UHX5: phenylpyruvate decarboxylase β subunit (EC 4.1.1.43) from Streptomyces virginiae | 44% id, 98% cov |
| Dshi_2159: Transketolase central region (RefSeq) is similar to: | PaperBLAST |
ppdcβ / G1UHX5: phenylpyruvate decarboxylase β subunit (EC 4.1.1.43) from Streptomyces virginiae | 38% id, 99% cov |
| Dshi_2566: Transketolase central region (RefSeq) is similar to: | PaperBLAST |
ppdcβ / G1UHX5: phenylpyruvate decarboxylase β subunit (EC 4.1.1.43) from Streptomyces virginiae | 31% id, 98% cov |
| Dshi_0534: dehydrogenase E1 component (RefSeq) is similar to: | PaperBLAST |
ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae | 27% id, 86% cov |
| Dshi_2158: Pyruvate dehydrogenase (acetyl-transferring) (RefSeq) is similar to: | PaperBLAST |
ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae | 32% id, 73% cov |
| Dshi_1269: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
pdc / Q5NYJ8: phenylpyruvate decarboxylase (EC 4.1.1.43) from Aromatoleum aromaticum | 26% id, 87% cov |
| Dshi_1779: acetolactate synthase, large subunit, biosynthetic type (RefSeq) is similar to: | PaperBLAST |
ipdC / P51852: phenylpyruvate decarboxylase (EC 4.1.1.43) from Azospirillum brasilense | 25% id, 60% cov |
PDC5_YEAST / P16467: Pyruvate decarboxylase isozyme 2; Thiamine pyrophosphate-dependent 2-oxo-acid decarboxylase; 2ODC; EC 4.1.1.-; EC 4.1.1.43; EC 4.1.1.72; EC 4.1.1.74 from Saccharomyces cerevisiae | 23% id, 56% cov |
PDC6_YEAST / P26263: Pyruvate decarboxylase isozyme 3; Thiamine pyrophosphate-dependent 2-oxo-acid decarboxylase; 2ODC; EC 4.1.1.-; EC 4.1.1.43; EC 4.1.1.72; EC 4.1.1.74 from Saccharomyces cerevisiae | 22% id, 55% cov |
| Dshi_2045: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
ipdC / P51852: phenylpyruvate decarboxylase (EC 4.1.1.43) from Azospirillum brasilense | 26% id, 52% cov |
ipdC / P51852: phenylpyruvate decarboxylase (EC 4.1.1.43) from Azospirillum brasilense | 32% id, 27% cov |
| Dshi_0805: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
ipdC / P51852: phenylpyruvate decarboxylase (EC 4.1.1.43) from Azospirillum brasilense | 26% id, 52% cov |
ipdC / P51852: phenylpyruvate decarboxylase (EC 4.1.1.43) from Azospirillum brasilense | 32% id, 27% cov |
| Dshi_1828: thiamine pyrophosphate protein central region (RefSeq) is similar to: | PaperBLAST |
ipdC / P51852: phenylpyruvate decarboxylase (EC 4.1.1.43) from Azospirillum brasilense | 27% id, 33% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 2286822-2287844 (frame +3) on 57145 is similar to: | PaperBLAST |
ppdcα / A0A222AKA3: phenylpyruvate decarboxylase α subunit (EC 4.1.1.43) from Streptomyces virginiae | 31% id, 80% cov |
Lawrence Berkeley National Laboratory