Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 10 curated entries in PaperBLAST's database that match '4.1.2.17' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_0523: L-fuculose-phosphate aldolase (RefSeq) is similar to: | PaperBLAST |
FUCA_ECOLI / P0AB87: L-fuculose phosphate aldolase; D-ribulose-phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Escherichia coli | 45% id, 97% cov |
BWI76_RS22915: L-fuculose phosphate aldolase (EC 4.1.2.17) from Klebsiella michiganensis | 44% id, 97% cov |
F8D9F5: D-ribulose 1-phosphate aldolase (EC 4.1.2.17) from Halopiger xanaduensis | 36% id, 91% cov |
Dshi_1553: class II aldolase/adducin family protein (RefSeq) is similar to: | PaperBLAST |
BWI76_RS22915: L-fuculose phosphate aldolase (EC 4.1.2.17) from Klebsiella michiganensis | 31% id, 93% cov |
FUCA_ECOLI / P0AB87: L-fuculose phosphate aldolase; D-ribulose-phosphate aldolase; L-fuculose-1-phosphate aldolase; EC 4.1.2.17 from Escherichia coli | 31% id, 93% cov |
BT1274: L-fuculose-1-phosphate aldolase FucA (4.1.2.17); D-ribulose-1-phosphate aldolase from Bacteroides thetaiotaomicron | 28% id, 83% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory