Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 5 curated entries in PaperBLAST's database that match '4.1.2.53' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1647: 2-dehydro-3-deoxyglucarate aldolase (RefSeq) is similar to: | PaperBLAST |
RHMA_ECOLI / P76469: 2-keto-3-deoxy-L-rhamnonate aldolase; KDR aldolase; 2-dehydro-3-deoxyrhamnonate aldolase; 2-keto-3-deoxy acid sugar aldolase; EC 4.1.2.53 from Escherichia coli | 42% id, 97% cov |
| Dshi_3145: HpcH/HpaI aldolase (RefSeq) is similar to: | PaperBLAST |
RHMA_ECOLI / P76469: 2-keto-3-deoxy-L-rhamnonate aldolase; KDR aldolase; 2-dehydro-3-deoxyrhamnonate aldolase; 2-keto-3-deoxy acid sugar aldolase; EC 4.1.2.53 from Escherichia coli | 31% id, 92% cov |
| Dshi_2586: HpcH/HpaI aldolase (RefSeq) is similar to: | PaperBLAST |
RHMA_ECOLI / P76469: 2-keto-3-deoxy-L-rhamnonate aldolase; KDR aldolase; 2-dehydro-3-deoxyrhamnonate aldolase; 2-keto-3-deoxy acid sugar aldolase; EC 4.1.2.53 from Escherichia coli | 30% id, 86% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 3 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory