Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 48 curated entries in PaperBLAST's database that match '4.1.3.1' as complete word(s).
These curated entries have 36 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
| Dshi_1092: carboxyvinyl-carboxyphosphonatephosphorylmutase (RefSeq) is similar to: | PaperBLAST |
Q05957: isocitrate lyase (EC 4.1.3.1) from Dianthus caryophyllus | 37% id, 89% cov |
ACEA1_MYCBO / P0A5H4: Isocitrate lyase 1; ICL1; Isocitrase; Isocitratase; EC 4.1.3.1 from Mycobacterium bovis | 28% id, 56% cov |
A0A3S5YB92: isocitrate lyase (EC 4.1.3.1) from Rhodococcus hoagii | 30% id, 41% cov |
| Dshi_0689: isocitrate lyase family protein (RefSeq) is similar to: | PaperBLAST |
Q05957: isocitrate lyase (EC 4.1.3.1) from Dianthus caryophyllus | 38% id, 84% cov |
ACEA_HALVD / D4GTL3: Isocitrate lyase; ICL; Isocitrase; Isocitratase; EC 4.1.3.1 from Haloferax volcanii | 35% id, 66% cov |
Q8RPZ0: isocitrate lyase (EC 4.1.3.1) from Streptomyces clavuligerus | 31% id, 62% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1119775-1120716 (frame +1) on 57145 is similar to: | PaperBLAST |
Q05957: isocitrate lyase (EC 4.1.3.1) from Dianthus caryophyllus | 37% id, 92% cov |
Lawrence Berkeley National Laboratory