Curated BLAST
Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 15 curated entries in PaperBLAST's database that match '4.2.1.18'.
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 12 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_1304: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti | 55% id, 99% cov |
liuC / Q88FM3: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas putida | 43% id, 97% cov |
Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 40% id, 97% cov |
AO356_01590: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 40% id, 96% cov |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 36% id, 97% cov |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 28% id, 96% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 25% id, 100% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 30% id, 80% cov |
hlyA: 3-hydroxy-3-methylglutaryl-coenzyme A lyase/3-methylglutaconyl-coenzyme A hydratase; EC 4.1.3.4; EC 4.2.1.18 from Emericella nidulans | 31% id, 43% cov |
More... |
Dshi_3370: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 40% id, 98% cov |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 36% id, 91% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 35% id, 91% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 38% id, 80% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 29% id, 98% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 34% id, 80% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 33% id, 74% cov |
More... |
Dshi_1048: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 38% id, 98% cov |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 34% id, 99% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 33% id, 93% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 32% id, 84% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 29% id, 72% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 29% id, 67% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 30% id, 65% cov |
More... |
Dshi_3329: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 34% id, 100% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 33% id, 93% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 33% id, 83% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 30% id, 82% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 30% id, 76% cov |
More... |
Dshi_1753: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 32% id, 99% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 30% id, 92% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 31% id, 83% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 26% id, 98% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 32% id, 80% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 32% id, 74% cov |
More... |
Dshi_3826: 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq) is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 32% id, 97% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 33% id, 89% cov |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 30% id, 92% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 31% id, 61% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 33% id, 56% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 33% id, 52% cov |
Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 29% id, 52% cov |
AO356_01590: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 29% id, 52% cov |
liuC / Q88FM3: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas putida | 28% id, 39% cov |
More... |
Dshi_3723: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 31% id, 97% cov |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 31% id, 94% cov |
SM_b21126: 3-methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Sinorhizobium meliloti | 28% id, 98% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 32% id, 84% cov |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 29% id, 95% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 32% id, 78% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 31% id, 81% cov |
More... |
Dshi_0067: Enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 32% id, 76% cov |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 30% id, 80% cov |
CA265_RS09125: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pedobacter sp. | 30% id, 74% cov |
Pf6N2E2_2193: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 27% id, 83% cov |
AO356_01590: Methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Pseudomonas fluorescens | 27% id, 82% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 30% id, 68% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 29% id, 54% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 28% id, 50% cov |
More... |
Dshi_0835: 3-hydroxyacyl-CoA dehydrogenase NAD-binding (RefSeq) is similar to: | PaperBLAST |
Q1D5Y4: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Myxococcus xanthus | 32% id, 74% cov |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus | 32% id, 54% cov |
AUHM_HUMAN / Q13825: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding protein/enoyl-CoA hydratase; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Homo sapiens AUH / Q13825: methylglutaconyl-CoA hydratase subunit (EC 4.2.1.18) from Homo sapiens Q13825: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Homo sapiens | 32% id, 50% cov |
Fer4 / Q4PEN0: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Ustilago maydis | 32% id, 50% cov |
BBSH_THAAR / Q9KJE7: (E)-benzylidenesuccinyl-CoA hydratase; EC 4.2.1.180 from Thauera aromatica bbsH / Q9KJE7: (2S)-2-[(R)-hydroxybenzyl]succinyl-CoA monomer (EC 4.2.1.180) from Thauera aromatica | 38% id, 40% cov |
F4JML5: methylglutaconyl-CoA hydratase (EC 4.2.1.18) from Arabidopsis thaliana | 40% id, 31% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 12 reading frames. Except for 1 reading frames, these were redundant with annotated proteins.
These remaining reading frames may be pseudogenes, omissions in the genome annotation,
or N-terminal extensions of annotated proteins.
130229-131278 (frame +2) on 57146 is similar to: | PaperBLAST |
AUHM_MOUSE / Q9JLZ3: Methylglutaconyl-CoA hydratase, mitochondrial; 3-MG-CoA hydratase; AU-specific RNA-binding enoyl-CoA hydratase; AU-binding enoyl-CoA hydratase; muAUH; Itaconyl-CoA hydratase; EC 4.2.1.18; EC 4.2.1.56 from Mus musculus Also see hits to annotated proteins above | 32% id, 99% cov |
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory