Searching in Dinoroseobacter shibae DFL-12 (Dino)
Found 12 curated entries in PaperBLAST's database that match '4.2.1.43'.
These curated entries have 11 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query
Dshi_2446: dihydrodipicolinate synthetase (RefSeq) is similar to: | PaperBLAST |
Ac3H11_603: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Acidovorax sp. | 59% id, 100% cov |
KDADA_AZOBR / Q1JUQ0: L-2-keto-3-deoxyarabonate dehydratase; L-KDA dehydratase; 2-dehydro-3-deoxy-L-arabinonate dehydratase; L-2-keto-3-deoxyarabinonate dehydratase; EC 4.2.1.43 from Azospirillum brasilense | 57% id, 97% cov |
HSERO_RS06870: L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) from Herbaspirillum seropedicae | 54% id, 100% cov |
Dshi_2542: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (RefSeq) is similar to: | PaperBLAST |
xacE / D4GP28: 2-dehydro-3-deoxy-L-arabinonate dehydratase (EC 4.2.1.43; EC 4.2.1.141) from Haloferax volcanii | 23% id, 92% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory