Curated BLAST for Genomes

 

Curated BLAST

Searching in Dinoroseobacter shibae DFL-12 (Dino)

Found 8 curated entries in PaperBLAST's database that match '5.1.3.32' as complete word(s).

These curated entries have 3 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Dinoroseobacter shibae DFL-12, or try another query

Dshi_2430: L-rhamnose 1-epimerase (RefSeq)
is similar to:
PaperBLAST

RHAM_RHILT / Q7BSH1: L-rhamnose mutarotase; Rhamnose 1-epimerase; Type-3 mutarotase; EC 5.1.3.32 from Rhizobium leguminosarum
rhaU / Q7BSH1: L-rhamnose mutarotase monomer (EC 5.1.3.32) from Rhizobium leguminosarum
Q7BSH1: L-rhamnose mutarotase (EC 5.1.3.32) from Rhizobium leguminosarum

69% id,
98% cov

PLH21_FORAG / T2KM13: L-rhamnose mutarotase; P21_mutarotase; Polysaccharide utilization locus H protein P21; PUL H protein P21; Rhamnose 1-epimerase; Type-3 mutarotase; EC 5.1.3.32 from Formosa agariphila

54% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory